Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1690 |
Symbol | |
ID | 8411213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1619303 |
End bp | 1620034 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645020017 |
Product | ABC transporter related |
Protein accession | YP_003177511 |
Protein GI | 257387738 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.653327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTAC TTCGACTCGA AGACGTCGAG AAATCGTACG GGAAAGAGGA GGTACTGCAC GGCGTCGGGT TCGAGATGGA CACACGGGAC GTGGACGTGA TCGTCGGCCC GAGCGGATCG GGCAAGTCCA CCCTGTTGCG CTGTATCAAC CGTCTCACCG AGATCGACGG CGGGTCGATC TTCCTCGACG GCGAGGACGT CCACGCGATG GACGAGAACG ACCTCCGGCG ACGGGTCGGG ATGGTGTTTC AGGACTTCAA TCTCTTCGCG CACCGCACCG CGGTGGGCAA CGTCACGCTG GGGCTGACCG AGGTGCTCGA TCTCCCGAGC GGCGAGGCCC ACGACCGCGC GATGGAGTTC CTCGACCGCG TCGGGCTGGC CGAGCAGGCA GACTCCTACC CGGCAGAGCT GTCCGGCGGC CAGAAACAGC GGGTCGGGAT CGCTCGCTCG CTGGCGATGG ACCCGGAGCT CATCCTCTTC GACGAACCCA CCAGCGCGCT GGACCCGGAA CTGATCGGCG AGGTGCTGGG CGTGATGAAC GACCTGGCCG ACGAGGGGAT GACGATGCTG TGTGTCACCC ACGAGATGGG CTTTGCCCGC TCTGCGGCCA CGACGCTCAC CTTCCTCGAC GACGGGCGGA TCGTCGAACG GGGACCGCCC GAACAGCTGT TCGACGACCC CGAACACGAC CGCACACGCG AGTTCCTGGG CGACCTCACA GAGATCCACT GA
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Protein sequence | MSLLRLEDVE KSYGKEEVLH GVGFEMDTRD VDVIVGPSGS GKSTLLRCIN RLTEIDGGSI FLDGEDVHAM DENDLRRRVG MVFQDFNLFA HRTAVGNVTL GLTEVLDLPS GEAHDRAMEF LDRVGLAEQA DSYPAELSGG QKQRVGIARS LAMDPELILF DEPTSALDPE LIGEVLGVMN DLADEGMTML CVTHEMGFAR SAATTLTFLD DGRIVERGPP EQLFDDPEHD RTREFLGDLT EIH
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