Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1684 |
Symbol | |
ID | 8411207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1612166 |
End bp | 1613686 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645020011 |
Product | phytoene desaturase |
Protein accession | YP_003177505 |
Protein GI | 257387732 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.127101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.929667 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGTC GGCGCTCGGG CGATCCGACG GTGACGGTGA TCGGCGGCGG GTTCGGCGGC CTCTCGGCGG CCGCGTACCT CGGACGGGCA GGACTGGACG TGCGACTCCT CGAACGCCAC GACCGGGTCG GGGGTCACGC CGGTGTACTC GAACGCGACG GGTTCCGGTT CGACACGGGA CCGTCCTGGT ACCTGATGCC CGACGTGTTC GAGCGGTTCT TCGCTCACTT CGACCGCGAA CCGGGTGACT ACTACGAACT GGAGCGACTC GATCCACAGT ACCGGGTGTG CTGGAAGGAC GGCGACAGCG TGACGGTCCC GCCCGATCGC GACCGCGTCG AGGCGATCTT CGAGTCCTAC GAGGAGGGGG CCGGCGAGGC ACTCGCCGCG TACCTCGACG ACGCCGAGCG CAACTACGAG CTGGCGATGG ATCGCGTCGT CTACGAGGGC CGTGAGCGAC TCCGAGAGTT CGTCGACACC GACCTGCTCC CGATGGCACC GCGCTATCGC CTGTTCGGGA ACATAGACGA CTACGTGAGC CGCTACGTCG AGCACCCGAA GCTCCGTCAG CTCCTGGAGT ACACCCTCGT CTTCCTCGGT GGCTCGCCGT ACAACACCCC TGCGCTGTAC TCGATCATGA GTCACGTCGA CCTGAACCTG AACGTCTTCT ACCCGGAGGG GGGTATCGCT GGCGTCGTCG ACGCGCTGGC GGAGCTGGCC CGCGAGCAAG GCGTCACCAT CCGGACCGGC GTCGAGGTCC AGCACGTCGG CGGCGAGGCC GGTCAGTTCG AACTGTCGAC CGACGACGGC CTCGTAGAGA GCGACCTCGT CGTCAGCAAC GCCAACCCGG CCGACACCGA GCGAGCGCTG CTCGACGACC GGGACCGCGC ACACGACCCC GGATACTGGG ACGACCAGAC CTACGCGCCG TCGGCGTTCT TGCTGTATCT CGGCGTCGAG GGCGACGTGG ACCCGCTCGA ACATCACACG CTCGTCTTGC CGACGGACTG GTCGGACCAC TTCGAGGCGA TCTTCGACGA GCCGCGCTGG CCCGACGATC CGGCCTACTA CCTCTCGGTG ACCTCGAAGA CCGACGACAC CGTCGCTCCC GACGGACACC ACGCGGTCGT CGCGCTCGTC CCGATCGCTC CGGGTCTCGA CGACGCTCCG GACGTGCGCG AGCGGTTCCG CGAGCAGGTC CTCACGGATC TGGCAGAACA CACCGGCGTG GACCTCCGCG ATCGGATCGT CTCGGAGACG ACGGCCTGCG TCAGCGAGTT CGCCGACCGC TACGGTGACC CCGACGGGAC GGCGCTGGGT CTCGCACACA CCCTGTTCCA GACCGGTCCC TTCCGACCGA GTCACCGCGG TCCACTGGAC GGCTTCTACT ACACCGGGGC CTACACGACG CCGGGGATCG GGATGCCGAT GTGTCTCATC AGCGGCGAAC ACACCGCCAC CGCGATCTTC GAGGACTATC CGGCGCTGGG CGACACCGAG GCCCTCGCGT CGGTCGAGTG A
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Protein sequence | MQSRRSGDPT VTVIGGGFGG LSAAAYLGRA GLDVRLLERH DRVGGHAGVL ERDGFRFDTG PSWYLMPDVF ERFFAHFDRE PGDYYELERL DPQYRVCWKD GDSVTVPPDR DRVEAIFESY EEGAGEALAA YLDDAERNYE LAMDRVVYEG RERLREFVDT DLLPMAPRYR LFGNIDDYVS RYVEHPKLRQ LLEYTLVFLG GSPYNTPALY SIMSHVDLNL NVFYPEGGIA GVVDALAELA REQGVTIRTG VEVQHVGGEA GQFELSTDDG LVESDLVVSN ANPADTERAL LDDRDRAHDP GYWDDQTYAP SAFLLYLGVE GDVDPLEHHT LVLPTDWSDH FEAIFDEPRW PDDPAYYLSV TSKTDDTVAP DGHHAVVALV PIAPGLDDAP DVRERFREQV LTDLAEHTGV DLRDRIVSET TACVSEFADR YGDPDGTALG LAHTLFQTGP FRPSHRGPLD GFYYTGAYTT PGIGMPMCLI SGEHTATAIF EDYPALGDTE ALASVE
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