Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1674 |
Symbol | |
ID | 8411197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1602272 |
End bp | 1604086 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645020001 |
Product | formate/nitrite transporter |
Protein accession | YP_003177495 |
Protein GI | 257387722 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2116] Formate/nitrite family of transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.368591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGAAC AGGATCCACC AGATCCCGAG GAGAGCGTGA GAGAGGCCGT CGAGCGGTCT CGCAGTGGGG CTCCGGCAGT GGGACGGGTC GTTCGCGACC GGTTCTCGAC CGACGAGGTG TTCCAGCGCA TCGTCGCCGC GGCCGACGAG GAGATCACGT CGGGCAGTCG CGAGCTGTAC TTCAGCGGTC TGGCGGCCGG GTTCGCGATC ACGATCACGT TCCTGATGCT GGTGTCGCTG ACGGCCTCGA CCGGCGGCGA CCCGATTCTG AGCACGCTCC TGTACCCGCT GGGGTTCATC TACATCATCA TCGGCGGCTA CCAGCTGTAC ACGGAGAACA CGCTGCCGCC CGTCGCGCTG ACGCTGGAGC GCATCGCCAG CGTGCCCGCG CTCTTGCGCA ACTGGATCGT CGTGCTCGCC GGGAACTTCA CCGGCGGCGC GATCGGCGCG ATGGCGCTGG CCTGGGGCGG GGTGCTGTCG GCCGACGGGA CGGCCGCGGC GTTCTCGATC GCACAGAAGG GCATCAAGGC GAGCCAGGGC GAACTGTTCG TGAAGGCCGC GTTCGCCGGG CTGATCGTCG CTGGCGTCGT CTGGGTCGAG TACGCCTCTC GGGACACGAT CTCGCGGATC GCCGTCGTCT ACCTCGCCTT CCTCGCGATC CCGCTTGGCG GGCTCTACCA CGTCGTGGTC TCCTTTACCG AGATGGTGTA TCTGGTGCTG GTCGGCGATC TCGGGGTCGT CGTCGGGATG GTCGAGTTCG TGCTCCCCGT GTTGCTCGGT AACACCGTCG GCGGCATCCT GCTGGTCACC GTCGTCAACT ACTTCCAGAC GACCGAGGAG CGCCTGGAGT CGGCCCGTTT CGACGGTGCC AACCGACAGC TCTCCTGGCG AGAGTGGATC CTGGGCGGTC TCGCGGGGCG GTCGTACGTG CCCCTGATCG ACACGAGCGA GCGAGCGGCC GGACACGGCG CTGGCTCCGA GCGGATCCTT GTTCCGATCT CCAACCCGCG GACCGAGGGG ACCCTCGCCG AGCTCGCGTG TGCGTACGCT GCCGGCAAGG AGGCGGCCTA CGTGGAGTTC GTCCACATCG TCCGCCTGCC CGACCGGCTG GCGGGCGGGT ACGGCGGCGA CCAGACCGAC CAGATCGTCG CCGAATCCGA CGCACAGATG GAGCGGGTCC GCGAGATCGC GTCCAGCTAC GAGGTCGACT CCGAGACCTC GACGATCGTC TCGCATCGCT CCATCGAGGA GGTGTTCCAG CTCGCAGACC GGAAGGGCGC GGACACGGTC GTGATGGGCT GGGACGAGGA CGCGCTCTGG AAGGCCGGCC GGGCCGAACG CCCGCTCGAC GAGCTGACGA GTTCGCTCCC GGCGGACTTC CTGGTGCTTG CCGATCGCGG GTTCGATCCC GAGGAGATCC TGATTCCGGT CGCGGGCAAC GAACACTCCG TGCTGAGCGG CGAAGTCGCC AGTGCGCTCG GCCAGACCGT CGGTTCGGCG ATCTCGCTGC TCCGGGTCGC CGACGGGCCG GGCCGGCGGA CGGAAAACGA GGACTTTCTC GCCCGGTGGG CGAAGAACAA CGACCTCGAA TCGGCAGACC GCATCGTCGA CGACAGCGGC GACGTCGAGG GGGCCATCGT GCGGGCCGCA CCGGAACACG GCCTCATCAT CATCGGGGCG ACCAGAGACG GGCTCCTCTC GCGGATCGGG AGCGACTCGC TGCACCTCGA CGTGCTGTCG GACGTGGACT GCTCGGTGTT GCTCGCCGAG CGAGCGACCG AGCGCGGGCT GCTCCAGCGG CTGTTCGGGA ACTGA
|
Protein sequence | MDEQDPPDPE ESVREAVERS RSGAPAVGRV VRDRFSTDEV FQRIVAAADE EITSGSRELY FSGLAAGFAI TITFLMLVSL TASTGGDPIL STLLYPLGFI YIIIGGYQLY TENTLPPVAL TLERIASVPA LLRNWIVVLA GNFTGGAIGA MALAWGGVLS ADGTAAAFSI AQKGIKASQG ELFVKAAFAG LIVAGVVWVE YASRDTISRI AVVYLAFLAI PLGGLYHVVV SFTEMVYLVL VGDLGVVVGM VEFVLPVLLG NTVGGILLVT VVNYFQTTEE RLESARFDGA NRQLSWREWI LGGLAGRSYV PLIDTSERAA GHGAGSERIL VPISNPRTEG TLAELACAYA AGKEAAYVEF VHIVRLPDRL AGGYGGDQTD QIVAESDAQM ERVREIASSY EVDSETSTIV SHRSIEEVFQ LADRKGADTV VMGWDEDALW KAGRAERPLD ELTSSLPADF LVLADRGFDP EEILIPVAGN EHSVLSGEVA SALGQTVGSA ISLLRVADGP GRRTENEDFL ARWAKNNDLE SADRIVDDSG DVEGAIVRAA PEHGLIIIGA TRDGLLSRIG SDSLHLDVLS DVDCSVLLAE RATERGLLQR LFGN
|
| |