Gene Hmuk_1674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1674 
Symbol 
ID8411197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1602272 
End bp1604086 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content68% 
IMG OID645020001 
Productformate/nitrite transporter 
Protein accessionYP_003177495 
Protein GI257387722 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.368591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAC AGGATCCACC AGATCCCGAG GAGAGCGTGA GAGAGGCCGT CGAGCGGTCT 
CGCAGTGGGG CTCCGGCAGT GGGACGGGTC GTTCGCGACC GGTTCTCGAC CGACGAGGTG
TTCCAGCGCA TCGTCGCCGC GGCCGACGAG GAGATCACGT CGGGCAGTCG CGAGCTGTAC
TTCAGCGGTC TGGCGGCCGG GTTCGCGATC ACGATCACGT TCCTGATGCT GGTGTCGCTG
ACGGCCTCGA CCGGCGGCGA CCCGATTCTG AGCACGCTCC TGTACCCGCT GGGGTTCATC
TACATCATCA TCGGCGGCTA CCAGCTGTAC ACGGAGAACA CGCTGCCGCC CGTCGCGCTG
ACGCTGGAGC GCATCGCCAG CGTGCCCGCG CTCTTGCGCA ACTGGATCGT CGTGCTCGCC
GGGAACTTCA CCGGCGGCGC GATCGGCGCG ATGGCGCTGG CCTGGGGCGG GGTGCTGTCG
GCCGACGGGA CGGCCGCGGC GTTCTCGATC GCACAGAAGG GCATCAAGGC GAGCCAGGGC
GAACTGTTCG TGAAGGCCGC GTTCGCCGGG CTGATCGTCG CTGGCGTCGT CTGGGTCGAG
TACGCCTCTC GGGACACGAT CTCGCGGATC GCCGTCGTCT ACCTCGCCTT CCTCGCGATC
CCGCTTGGCG GGCTCTACCA CGTCGTGGTC TCCTTTACCG AGATGGTGTA TCTGGTGCTG
GTCGGCGATC TCGGGGTCGT CGTCGGGATG GTCGAGTTCG TGCTCCCCGT GTTGCTCGGT
AACACCGTCG GCGGCATCCT GCTGGTCACC GTCGTCAACT ACTTCCAGAC GACCGAGGAG
CGCCTGGAGT CGGCCCGTTT CGACGGTGCC AACCGACAGC TCTCCTGGCG AGAGTGGATC
CTGGGCGGTC TCGCGGGGCG GTCGTACGTG CCCCTGATCG ACACGAGCGA GCGAGCGGCC
GGACACGGCG CTGGCTCCGA GCGGATCCTT GTTCCGATCT CCAACCCGCG GACCGAGGGG
ACCCTCGCCG AGCTCGCGTG TGCGTACGCT GCCGGCAAGG AGGCGGCCTA CGTGGAGTTC
GTCCACATCG TCCGCCTGCC CGACCGGCTG GCGGGCGGGT ACGGCGGCGA CCAGACCGAC
CAGATCGTCG CCGAATCCGA CGCACAGATG GAGCGGGTCC GCGAGATCGC GTCCAGCTAC
GAGGTCGACT CCGAGACCTC GACGATCGTC TCGCATCGCT CCATCGAGGA GGTGTTCCAG
CTCGCAGACC GGAAGGGCGC GGACACGGTC GTGATGGGCT GGGACGAGGA CGCGCTCTGG
AAGGCCGGCC GGGCCGAACG CCCGCTCGAC GAGCTGACGA GTTCGCTCCC GGCGGACTTC
CTGGTGCTTG CCGATCGCGG GTTCGATCCC GAGGAGATCC TGATTCCGGT CGCGGGCAAC
GAACACTCCG TGCTGAGCGG CGAAGTCGCC AGTGCGCTCG GCCAGACCGT CGGTTCGGCG
ATCTCGCTGC TCCGGGTCGC CGACGGGCCG GGCCGGCGGA CGGAAAACGA GGACTTTCTC
GCCCGGTGGG CGAAGAACAA CGACCTCGAA TCGGCAGACC GCATCGTCGA CGACAGCGGC
GACGTCGAGG GGGCCATCGT GCGGGCCGCA CCGGAACACG GCCTCATCAT CATCGGGGCG
ACCAGAGACG GGCTCCTCTC GCGGATCGGG AGCGACTCGC TGCACCTCGA CGTGCTGTCG
GACGTGGACT GCTCGGTGTT GCTCGCCGAG CGAGCGACCG AGCGCGGGCT GCTCCAGCGG
CTGTTCGGGA ACTGA
 
Protein sequence
MDEQDPPDPE ESVREAVERS RSGAPAVGRV VRDRFSTDEV FQRIVAAADE EITSGSRELY 
FSGLAAGFAI TITFLMLVSL TASTGGDPIL STLLYPLGFI YIIIGGYQLY TENTLPPVAL
TLERIASVPA LLRNWIVVLA GNFTGGAIGA MALAWGGVLS ADGTAAAFSI AQKGIKASQG
ELFVKAAFAG LIVAGVVWVE YASRDTISRI AVVYLAFLAI PLGGLYHVVV SFTEMVYLVL
VGDLGVVVGM VEFVLPVLLG NTVGGILLVT VVNYFQTTEE RLESARFDGA NRQLSWREWI
LGGLAGRSYV PLIDTSERAA GHGAGSERIL VPISNPRTEG TLAELACAYA AGKEAAYVEF
VHIVRLPDRL AGGYGGDQTD QIVAESDAQM ERVREIASSY EVDSETSTIV SHRSIEEVFQ
LADRKGADTV VMGWDEDALW KAGRAERPLD ELTSSLPADF LVLADRGFDP EEILIPVAGN
EHSVLSGEVA SALGQTVGSA ISLLRVADGP GRRTENEDFL ARWAKNNDLE SADRIVDDSG
DVEGAIVRAA PEHGLIIIGA TRDGLLSRIG SDSLHLDVLS DVDCSVLLAE RATERGLLQR
LFGN