Gene Hmuk_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1670 
Symbol 
ID8411193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1597536 
End bp1599434 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content67% 
IMG OID645019997 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003177491 
Protein GI257387718 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGGG CGAACAGTGT CGATCGAACG CGAGCGCCGC GAGGGGACAC CGTCGACGTC 
CTCTACGTCG ACCCGGACAC GGACTCGACG GTTCGAGACT CGTTCGGCGA CAGCGGGCCG
TTTCGCGTCA CACACGTCGC CGACGCGGCG ACGGCACTTG CCCACGTGAC GGACGGATCG
ACAGACTGTG TCGTCAGCGA ACAGGACCTC CCGGACGGTA GTGGGCTGTC GCTGCTGCGA
TCGATACGGC GTCGCGCCCC GTCGCTCCCG TTCGTGTTGT TCACCGACGA CGGCAGCGAG
ACGGTCGCCA GCGAGGCGAT CGACGCCGAC GTGACCGGCT ATCTCCGGCG GACGCCACTC
GAAGAACAGC TCCCCACGCT CGTCACGACC GTCACCGAGG CAGTGAGCCG CCCGCACGAA
CAGTCGGCGA TCCTCGATCG CATGACCGAC GCGTTCTTCG CGCTGGACGT GGAGTGGCGG
TTCACCTACC TCAACGAACG GGCGCGAGAG ATCGTGTGTG ACGCCGCCGA CGTGGATCGG
TCGATCGACG ACCTCGTCGG GACCCGAATC TGGGATCTGT TGCCGGAAGT CGTCGACACG
GAGTTCTACG ACCGATACAC CGAAGCGATG GACGAACAGC GGGTGACGAC CTTCGAGGCC
GAGTACGAGC CCCTCGGGAC GTGGTTCGAG GTGCGGGCCT ACCCCTCGGT CGACGGGCTC
TCGGTGTACT TCCAGGACGT GACGGATCGA AAGCACCGGA TCGAGACGCT CCGGGAGCGC
GAGCGCATCC TCAAGGAGAT GTACCGCGTC GTCTCCGAGA AGACGCTCAG CTTCGAGGAG
CAGGTCGATC GGTTGCTCTC GATCGGCCAG TCGGTGCTCG GAACCGACTA CGGGGCGCTC
TCCTCCAGAG AGGGCGACGA GTACGTCTTC GAGGTCGTTC GCGATCCGAC CGGCGACACC
CAGCCCGGGG ACCGGGTCGC GCTCGACGAG ACCAACTGCG AGCGGGCGAT CGTCACCGAA
GAGACGCTGG TCCTCGAAGA CATCGCACGG GACGCGCCGG AACTGGCCGA ACGCGCCGGA
TACACCGACG ATGGCATCGC CTGCTATCTC GGTACCCCCG TAGTGGTCGA GGACGAGGTG
TACGGCACGT TCTGCTTCTA CGACCGAGAG CCACGGACCG AGCCCTTCTC GGACTGGGAG
ATCGCCCTCG TGGAACTGCT CGGCAACTGG GTGAGCTACG AACAGGAGCG CCGCCGTCAC
CAGAACGAGA TCGCCCGCGA GCGAAACCGG CTCGAAGAGT TCGCCAGCGT CGTCAGCCAC
GACCTGCGCA ACCCGCTCAG CGTCGCACTC GGACGGATCG ACGTGGCACG CGAAACCGGG
GCCGAGGAGC ACTTCGACGC GATCGAGCGG TCGCTCCAGC GGATGGACAC GCTGATCGAG
GACATCCTGT CGGTGGCACG CGACGGCAGG ACCGTCTCGG AACCGACGCC GGTCGACATC
GAGACCGTCG CCGAGGACGC CTGGGCGGTC GTCGAAAGCG ACGAGGCGAC GCTGCGAATC
GACGTCGACG ACCGTTTCCT CGGCGACGCG ACGCGTCTCC AGCAGCTCCT GGAGAATCTC
TTTCGAAACG CGGTCCAGCA CGCCGGTCGA GGGGTCGTCA TCACCGTCGG GCCCCTCGAA
GAGGGGACCG GCTTCTACGT CGCCGACGAC GGCCCCGGTA TCCCCGAAGA CGAGCGCGAC
GACGTCTTCC AGTCTGCCTA CACGACCATC GACGACGGCA CCGGGTTCGG CCTCAAGATC
GTCTCCGAGA TCGCCGAGGC TCACGGCGGA TACGTCACCG TCACCGACGG CGACGACGGC
GGGGCGCGCT TCGAGATCCG TGACCTGCCC CTCGCCTGA
 
Protein sequence
MDRANSVDRT RAPRGDTVDV LYVDPDTDST VRDSFGDSGP FRVTHVADAA TALAHVTDGS 
TDCVVSEQDL PDGSGLSLLR SIRRRAPSLP FVLFTDDGSE TVASEAIDAD VTGYLRRTPL
EEQLPTLVTT VTEAVSRPHE QSAILDRMTD AFFALDVEWR FTYLNERARE IVCDAADVDR
SIDDLVGTRI WDLLPEVVDT EFYDRYTEAM DEQRVTTFEA EYEPLGTWFE VRAYPSVDGL
SVYFQDVTDR KHRIETLRER ERILKEMYRV VSEKTLSFEE QVDRLLSIGQ SVLGTDYGAL
SSREGDEYVF EVVRDPTGDT QPGDRVALDE TNCERAIVTE ETLVLEDIAR DAPELAERAG
YTDDGIACYL GTPVVVEDEV YGTFCFYDRE PRTEPFSDWE IALVELLGNW VSYEQERRRH
QNEIARERNR LEEFASVVSH DLRNPLSVAL GRIDVARETG AEEHFDAIER SLQRMDTLIE
DILSVARDGR TVSEPTPVDI ETVAEDAWAV VESDEATLRI DVDDRFLGDA TRLQQLLENL
FRNAVQHAGR GVVITVGPLE EGTGFYVADD GPGIPEDERD DVFQSAYTTI DDGTGFGLKI
VSEIAEAHGG YVTVTDGDDG GARFEIRDLP LA