Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1643 |
Symbol | |
ID | 8411166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1566685 |
End bp | 1568904 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645019970 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_003177464 |
Protein GI | 257387691 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACGT ACGTCTTCTG GGGGACCGTC GCCACGACGT TGGTCAGCGG GCTGATCTGC AGTGCCATGG CGGTGTTCGC CTGGCGCAAC CACGATCGCC CGGCGGCCGC GGCGTTTGGC TGGCTGATGG TCGCTGCCGC CGCGTGGGCG TTCATGGCGA CGGCCCGAGT CTTGACCGCG GAACCGGCGA GCGCGTATCT GTTCGACCGC TTCGCTCGGG CTGCCTCCAG TAGCACTGCC CCGCTCGTAC TGGTGTTCGT GCTCTCCTAT ATCGGACGTG AAGACGTTCT CACGCCGCGG TTCGTCGGGC TGGTGTGGAT CGTTCCGGCC GGCTACACCG CCCTCTCGGC GACGGCACCG CTCCACGGCT ACGTGCAGGG CCCCGAGAGC GTTTGGGTCG GAACGTGGGA GGATGCCGCC GTGTTGACCG TCACAGAGGG GATTCCCTCC CAGATCGATC TCCTCTACAC GTACGTCGTC CTCGCGGCGG CGTTCGTCCT CCTGGCACGC TTTCTCGTCA GATCGCGGGC CATCTACCGC CTCCAGACGG CGACGGTAGT GACTGCGATC CTCGTCCCGG TCATCGTCAA CGCCGCGACG CAGTTCTATC AGTTCTCGCA CCCGGGCGTG GATCTGACGC CGGCCGCGCT GGGCCTCACC GGACTGGTGC TCGGCTGGGG ACTGTTCCGG TACGACCTCC TCGACGTGAC GCCACTGGCG AGCGACATCC TCGTCGACGA ACTGCCCGAT CCGGTCTTCG TGCTGGCGGA AGACGGTCGG ATCCTCGACC ACAACCGCGC CGCCGAGGCG ATGTTCGACG CCGACCCTCT CTGTGACCGA CGGCTTACCA CCGTCGCACC GCGACTCGCA GAACGGCTCG ACGGCAGTTC GGTCTACTCG CGGTCCGACG GGCCCGCCGA AGAGGTCACG TACTTCGACC CGCAGGTCAC CTCGATCGAC GACCAGCACG GCGTCGAACG GGGGCGACTC GTCGTCTTGC GTGACGTGAC CGGCCAGCAG CGCCGCCAGG ACCGCCTGGA AGCCCTCCAG GCGGCGACCC AGAAGTTCAT CACGGCCAAC TCGGTCGAGC GCATCGCCGA GCTGACGGTG AGGTTCGCGG ACCGCGTCCT CGATCAGGAC ATCGCGGCCG TATACGTCCA CGAGAACGAT CGACTGTGCC CGATCGCCGC CAGCGACGGG CTCGAACGAG AGTGTACGCT GACGGAGTTG ACGGTCGAGG ATCGGGGCCA CCCGATCTAC AGCGCCTACG AGTCCGAGAC GATCGAGAGA GCGGACGTAC GAGACTCGGG AACGACGATG CCGTTCCGGT ATCTCCTCCT CGTTCCGATC GACAACCACG GCGTGCTGGC GATCGGCTCG CGCGAGCCCG GTGCGTTCGT GACCGAAGAC GAGCAGTTCG CGACGATCCT CGCCCGGACG ACGCAGGTCG CGTTCACGCA GGTCGACCGC GAACACGAGC TGCGCCAGAG CCGACAGGCC ATCGAGCGTC GCAACGAGCA GGTCGCGTTC TTCAACGGGG TGCTGCGACA CACGCTGCGC AACGCCCTGC TCGTCATCGA AGGACGAGCA AACCACCTGC GAGACCACGT CGACGACGCC AGACAGCGAC ACCTCGACCG CATCGTCCAG TGGTGTGAGG ATCTCTCGGA ACTCAGCGAG GAGATCGAAG CGATCAACGA CACCGTCACG GCCAGCGAGG CACAGCGCCT CGACAGGATC GATCTCGGCG GGGTGTTGTC CGACCGCGTC GACGTGCTCT CGGAGGACTT CACGGACGTG ACCATCGACC TGGCCGTCGA CGACGGGCTG ACCGTCCTCG CCAACGACCT CGTCGAGAAG GTCGTCGACA GCGTCATCTC GAACGCCATC ACGCACAACG ACGCACCAGC GCCCCGCGTC GAGATCACCG CCAGCGAGAT CGCCGACCGC GTCCAGCTCA GAGTCGCAGA CAACGGCCCC GGCATGACCG ACGAGATGAA AGAGACCGTC TTCGAGCGCA ACGTCGGGGC CAGCCAGACC AGCCACGGCT TCGGACTCTA CTTCGTTTCG GTGATGATGA ACCTCTACGG CGGGACAGTC TGGATCGAGG ACAACGACAT CCGCGACGAG GGCACGCGCC GCGGTGCCGT CGCCGTGCTG GAGTTCCAGC AGGCCGAGAC ACAACACACA TCCCGGTCGC CCGAAAACGA GCGGACATGA
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Protein sequence | MATYVFWGTV ATTLVSGLIC SAMAVFAWRN HDRPAAAAFG WLMVAAAAWA FMATARVLTA EPASAYLFDR FARAASSSTA PLVLVFVLSY IGREDVLTPR FVGLVWIVPA GYTALSATAP LHGYVQGPES VWVGTWEDAA VLTVTEGIPS QIDLLYTYVV LAAAFVLLAR FLVRSRAIYR LQTATVVTAI LVPVIVNAAT QFYQFSHPGV DLTPAALGLT GLVLGWGLFR YDLLDVTPLA SDILVDELPD PVFVLAEDGR ILDHNRAAEA MFDADPLCDR RLTTVAPRLA ERLDGSSVYS RSDGPAEEVT YFDPQVTSID DQHGVERGRL VVLRDVTGQQ RRQDRLEALQ AATQKFITAN SVERIAELTV RFADRVLDQD IAAVYVHEND RLCPIAASDG LERECTLTEL TVEDRGHPIY SAYESETIER ADVRDSGTTM PFRYLLLVPI DNHGVLAIGS REPGAFVTED EQFATILART TQVAFTQVDR EHELRQSRQA IERRNEQVAF FNGVLRHTLR NALLVIEGRA NHLRDHVDDA RQRHLDRIVQ WCEDLSELSE EIEAINDTVT ASEAQRLDRI DLGGVLSDRV DVLSEDFTDV TIDLAVDDGL TVLANDLVEK VVDSVISNAI THNDAPAPRV EITASEIADR VQLRVADNGP GMTDEMKETV FERNVGASQT SHGFGLYFVS VMMNLYGGTV WIEDNDIRDE GTRRGAVAVL EFQQAETQHT SRSPENERT
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