Gene Hmuk_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1643 
Symbol 
ID8411166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1566685 
End bp1568904 
Gene Length2220 bp 
Protein Length739 aa 
Translation table11 
GC content66% 
IMG OID645019970 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_003177464 
Protein GI257387691 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGT ACGTCTTCTG GGGGACCGTC GCCACGACGT TGGTCAGCGG GCTGATCTGC 
AGTGCCATGG CGGTGTTCGC CTGGCGCAAC CACGATCGCC CGGCGGCCGC GGCGTTTGGC
TGGCTGATGG TCGCTGCCGC CGCGTGGGCG TTCATGGCGA CGGCCCGAGT CTTGACCGCG
GAACCGGCGA GCGCGTATCT GTTCGACCGC TTCGCTCGGG CTGCCTCCAG TAGCACTGCC
CCGCTCGTAC TGGTGTTCGT GCTCTCCTAT ATCGGACGTG AAGACGTTCT CACGCCGCGG
TTCGTCGGGC TGGTGTGGAT CGTTCCGGCC GGCTACACCG CCCTCTCGGC GACGGCACCG
CTCCACGGCT ACGTGCAGGG CCCCGAGAGC GTTTGGGTCG GAACGTGGGA GGATGCCGCC
GTGTTGACCG TCACAGAGGG GATTCCCTCC CAGATCGATC TCCTCTACAC GTACGTCGTC
CTCGCGGCGG CGTTCGTCCT CCTGGCACGC TTTCTCGTCA GATCGCGGGC CATCTACCGC
CTCCAGACGG CGACGGTAGT GACTGCGATC CTCGTCCCGG TCATCGTCAA CGCCGCGACG
CAGTTCTATC AGTTCTCGCA CCCGGGCGTG GATCTGACGC CGGCCGCGCT GGGCCTCACC
GGACTGGTGC TCGGCTGGGG ACTGTTCCGG TACGACCTCC TCGACGTGAC GCCACTGGCG
AGCGACATCC TCGTCGACGA ACTGCCCGAT CCGGTCTTCG TGCTGGCGGA AGACGGTCGG
ATCCTCGACC ACAACCGCGC CGCCGAGGCG ATGTTCGACG CCGACCCTCT CTGTGACCGA
CGGCTTACCA CCGTCGCACC GCGACTCGCA GAACGGCTCG ACGGCAGTTC GGTCTACTCG
CGGTCCGACG GGCCCGCCGA AGAGGTCACG TACTTCGACC CGCAGGTCAC CTCGATCGAC
GACCAGCACG GCGTCGAACG GGGGCGACTC GTCGTCTTGC GTGACGTGAC CGGCCAGCAG
CGCCGCCAGG ACCGCCTGGA AGCCCTCCAG GCGGCGACCC AGAAGTTCAT CACGGCCAAC
TCGGTCGAGC GCATCGCCGA GCTGACGGTG AGGTTCGCGG ACCGCGTCCT CGATCAGGAC
ATCGCGGCCG TATACGTCCA CGAGAACGAT CGACTGTGCC CGATCGCCGC CAGCGACGGG
CTCGAACGAG AGTGTACGCT GACGGAGTTG ACGGTCGAGG ATCGGGGCCA CCCGATCTAC
AGCGCCTACG AGTCCGAGAC GATCGAGAGA GCGGACGTAC GAGACTCGGG AACGACGATG
CCGTTCCGGT ATCTCCTCCT CGTTCCGATC GACAACCACG GCGTGCTGGC GATCGGCTCG
CGCGAGCCCG GTGCGTTCGT GACCGAAGAC GAGCAGTTCG CGACGATCCT CGCCCGGACG
ACGCAGGTCG CGTTCACGCA GGTCGACCGC GAACACGAGC TGCGCCAGAG CCGACAGGCC
ATCGAGCGTC GCAACGAGCA GGTCGCGTTC TTCAACGGGG TGCTGCGACA CACGCTGCGC
AACGCCCTGC TCGTCATCGA AGGACGAGCA AACCACCTGC GAGACCACGT CGACGACGCC
AGACAGCGAC ACCTCGACCG CATCGTCCAG TGGTGTGAGG ATCTCTCGGA ACTCAGCGAG
GAGATCGAAG CGATCAACGA CACCGTCACG GCCAGCGAGG CACAGCGCCT CGACAGGATC
GATCTCGGCG GGGTGTTGTC CGACCGCGTC GACGTGCTCT CGGAGGACTT CACGGACGTG
ACCATCGACC TGGCCGTCGA CGACGGGCTG ACCGTCCTCG CCAACGACCT CGTCGAGAAG
GTCGTCGACA GCGTCATCTC GAACGCCATC ACGCACAACG ACGCACCAGC GCCCCGCGTC
GAGATCACCG CCAGCGAGAT CGCCGACCGC GTCCAGCTCA GAGTCGCAGA CAACGGCCCC
GGCATGACCG ACGAGATGAA AGAGACCGTC TTCGAGCGCA ACGTCGGGGC CAGCCAGACC
AGCCACGGCT TCGGACTCTA CTTCGTTTCG GTGATGATGA ACCTCTACGG CGGGACAGTC
TGGATCGAGG ACAACGACAT CCGCGACGAG GGCACGCGCC GCGGTGCCGT CGCCGTGCTG
GAGTTCCAGC AGGCCGAGAC ACAACACACA TCCCGGTCGC CCGAAAACGA GCGGACATGA
 
Protein sequence
MATYVFWGTV ATTLVSGLIC SAMAVFAWRN HDRPAAAAFG WLMVAAAAWA FMATARVLTA 
EPASAYLFDR FARAASSSTA PLVLVFVLSY IGREDVLTPR FVGLVWIVPA GYTALSATAP
LHGYVQGPES VWVGTWEDAA VLTVTEGIPS QIDLLYTYVV LAAAFVLLAR FLVRSRAIYR
LQTATVVTAI LVPVIVNAAT QFYQFSHPGV DLTPAALGLT GLVLGWGLFR YDLLDVTPLA
SDILVDELPD PVFVLAEDGR ILDHNRAAEA MFDADPLCDR RLTTVAPRLA ERLDGSSVYS
RSDGPAEEVT YFDPQVTSID DQHGVERGRL VVLRDVTGQQ RRQDRLEALQ AATQKFITAN
SVERIAELTV RFADRVLDQD IAAVYVHEND RLCPIAASDG LERECTLTEL TVEDRGHPIY
SAYESETIER ADVRDSGTTM PFRYLLLVPI DNHGVLAIGS REPGAFVTED EQFATILART
TQVAFTQVDR EHELRQSRQA IERRNEQVAF FNGVLRHTLR NALLVIEGRA NHLRDHVDDA
RQRHLDRIVQ WCEDLSELSE EIEAINDTVT ASEAQRLDRI DLGGVLSDRV DVLSEDFTDV
TIDLAVDDGL TVLANDLVEK VVDSVISNAI THNDAPAPRV EITASEIADR VQLRVADNGP
GMTDEMKETV FERNVGASQT SHGFGLYFVS VMMNLYGGTV WIEDNDIRDE GTRRGAVAVL
EFQQAETQHT SRSPENERT