Gene Hmuk_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1630 
Symbol 
ID8411153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1550525 
End bp1551718 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID645019957 
ProductNucleotidyl transferase 
Protein accessionYP_003177451 
Protein GI257387678 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAC GAACCGCCGT CGTCCTGGCG GCCGGTGAGG GAACGCGACT GCGCCCGCTG 
ACGCGCAACC GTCCCAAGCC GATGTTACCC GCGGGGAACC GCCCGATTCT CGAATACGTC
TTCGACGCAC TCGTCGAGGC CGGTCTCGAC AGGATCGTCG TCGTCGTCGG CTACAAGCGC
GATCGCGTGC AAGATCACTT CGGCCCGTCC TACCGGGGCG TCCCCCTGCG CTACGTCACA
CAGCGCAAAC AGCTGGGCAG CGGCCACGCC CTCCTGCAGG CCCGCGACGC GGTGTCCGGT
TCCGTCCTCG TGGTCAACGG CGATCGAGTC ATCGACGGCG AGACGGTCGG CTCCGTGATC
GACCACTTCG AGACCGATCC AGAGACGCCG GCACTGGCGG TCTTGGAGCA GCGGGACGCC
AGCCACTACG GTGCCGTCGA CCTGCGGGAC GGCGATCTCG TCTCGATCGT CGAAAAGCCC
GAGACCGACG AGTATCGTCT GATCAACGGC GGCATCTACG CGTTCCCCGA GTCGATCTTC
GACGAGATCG AGGCCACGCC ACGGGCAGAG GGCGAGCTGG CACTGACCGA CACGATCGCA
CGCCTGATCG ACTCCGATCG GGTCCGCGCG GTCACGACCG ACGGCCTGTG GGTCGACGCG
ACGTATCCCT GGGACCTGCT GACGGTCGCC CGCGAGGTGC TCGCCCGCGG ACGGGTCACG
GAGTCGAACC GTCGGGACAG TGTCTGGGTC GCCGACTCCG CGCACGTCCA CGAGGACGCG
ACGCTGCAAG CGCCGGTCGT GGTCGGTCCG GACTGCGAGG TGGCGGCGGG GACCGTGCTC
GGACCGGACG CGGCGCTGGG AGCGAACGTC ACCGTCGGCG CGAACGCGAC GGTCCAGCAG
TCGGTGCTCG ACGCGGACAC GCGCGTCGAC GCGGGCGCGA CGCTGGTCGA TACGGTCGCC
GGACAGGACG TGACACTCGG CGTCGAGACG GTCGTCCCCG GCGGTCCCGC GGACGTACAG
ATCGGGACCG AGGTGTTCGA AGACCGGACG CTCGGTGCGG TGTTCGCCGA CCGCGTGACG
ACCCGAGGGA ACGTCTCGGT GTCGCCCGGG ACGCTGGTCG GCCCGTCGGC GACCCTCCAC
GCGGGCGTTC ACGCCTTCGG CCACGTCGCC GAGGACGCCG AGGTGGTCCG CTGA
 
Protein sequence
MSVRTAVVLA AGEGTRLRPL TRNRPKPMLP AGNRPILEYV FDALVEAGLD RIVVVVGYKR 
DRVQDHFGPS YRGVPLRYVT QRKQLGSGHA LLQARDAVSG SVLVVNGDRV IDGETVGSVI
DHFETDPETP ALAVLEQRDA SHYGAVDLRD GDLVSIVEKP ETDEYRLING GIYAFPESIF
DEIEATPRAE GELALTDTIA RLIDSDRVRA VTTDGLWVDA TYPWDLLTVA REVLARGRVT
ESNRRDSVWV ADSAHVHEDA TLQAPVVVGP DCEVAAGTVL GPDAALGANV TVGANATVQQ
SVLDADTRVD AGATLVDTVA GQDVTLGVET VVPGGPADVQ IGTEVFEDRT LGAVFADRVT
TRGNVSVSPG TLVGPSATLH AGVHAFGHVA EDAEVVR