Gene Hmuk_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1614 
Symbol 
ID8411137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1536649 
End bp1537728 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content68% 
IMG OID645019941 
Productputative transcriptional regulator, AsnC family 
Protein accessionYP_003177435 
Protein GI257387662 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000928597 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG AGCTGGGGTC CGTCGACCGC GCGATCGCCA ACGCCTTCCA GGGTGGATTC 
CCGGTCGTCG AGCGGCCCTT CGAGCCCGCC GCGGCGGCGC TGCGGGACCG CGGCATCGAC
GTGACCGAAG GCGAACTGGT CGAGCGGATC GCCCGCATGG ACGAGGCGGG GACGCTGACT
CGCTTCGGCG CGCTGATCGA CGCCGAGGCG ATCGGCGGGA TGGCGACGCT GGTGGCGATG
CACGCCCCAG AAGAGCGGTT CGACGAGGTG GCAGAGCGGG TCAACGACTT CCGCGAGGTG
GCCCACAACT ACCGCCGTGA GCACCCCCAC CTGAACATGT GGTTCGTCCT CTCGGTGGCC
GACGAGGATC GGATTCCAGC GGTGCTCGCC GAGATCGAGG ACGCGACCGG CCAGGAGACC
TACAACCTCC CGAAGCAACG GGAGTTCCGC GTCGAAGCGA AGTTCCCCGT CGAGGGCCCG
CTCGAAGACG ACAGCGTCGA TCTGTCGGCA CTGGGTCCCG ACGTGACACC GACCGACCGG
GACGGCCTGA CGCCCGACGA ACTCGATCTG GTACTGGAGA TTCAGGGCGG ACTCCCGGTG
ACTGAGACGC CCTACCGAGA CGTGGCCGAC GCCATCGACG CCGAGACCGA GTGGGTCGTC
GAGACGATCA AGCGCTTCGA GCGCGAGGGG AAGGTCCGCC GGGTCGGTGT CGTCCCCAAC
CACTACGCGC TGGGCTACTC CGAGAACGGG ATGACCGTCT GGAACGTCCC CGACGACGTG
GTCGAGGAGG TCGGCCCCGC GGTCGCGAGC TTCGACTTCG TCACCCACTG CTACGAGCGA
CCGCGCCACG ACGGCGTCTG GGAGTACAAC GTCTTCGCGA TGACCCACGG CCGCAGCGAG
GCCGAGAGCG ACCGGCGCGT CGAGCAAGTA CGGGATCGGA TGGCGGAGTA CTGGGACGTG
TCCGAGAGCG ACTGGGACAC GCTGTTCTCG ACGGAGATCC TCAAGAAGAC CGGCATCCGG
ATGGACGAGC GCGCCGAGGC GAACGTGATC GACCCCGCCG ACGAGCCGAC GAGGGACTGA
 
Protein sequence
MSEELGSVDR AIANAFQGGF PVVERPFEPA AAALRDRGID VTEGELVERI ARMDEAGTLT 
RFGALIDAEA IGGMATLVAM HAPEERFDEV AERVNDFREV AHNYRREHPH LNMWFVLSVA
DEDRIPAVLA EIEDATGQET YNLPKQREFR VEAKFPVEGP LEDDSVDLSA LGPDVTPTDR
DGLTPDELDL VLEIQGGLPV TETPYRDVAD AIDAETEWVV ETIKRFEREG KVRRVGVVPN
HYALGYSENG MTVWNVPDDV VEEVGPAVAS FDFVTHCYER PRHDGVWEYN VFAMTHGRSE
AESDRRVEQV RDRMAEYWDV SESDWDTLFS TEILKKTGIR MDERAEANVI DPADEPTRD