Gene Hmuk_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1596 
Symbol 
ID8411118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1521325 
End bp1522359 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content68% 
IMG OID645019922 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003177417 
Protein GI257387644 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA TCGACGAATC CGACAGCCCG ACTGCACGGG ACGCCGTCGA AGAGCCCGGC 
GAGGAGCCCG CGGAGATCGA AGCCCGCGTG GGATGGCGGT ACACGTTCTC CCAGATCCGG
AGCGATCCGA CGGCGATGAC CGGTCTGGCG ATCATCGCCG CCGTCACCGC GATGGCCACG
TTCGCGACGA TCGACTCCGT ACTGTTCGAG TTCCTCGCGG GCTATCGCCT GTTCGCACAG
TTCGGCGTCG AGAAGTACTG GATCGCCAAG ACGGTGTGGG TGAGTCCGGT GAGCGAGTCG
GCTGCGACCC CGCGGCTGCT CCCGCCGGTC GGCTTCGAGA ATCAGTTCGG GGCCGGCTCG
TGGGCCCATC CGCTGGGCAC CGACGACCGG GGGCGTGACA TCCTGTTGCG GCTCGTCTAC
GGCTCGCGGA TCGCGGTCAC GGTCGGGCTG AGCGCGACGG TCGTCGGCTT CGCCAGCGGC
ACCGTCGTCG GTGCGGTCTC TGGCTACTAC GGGGACTGGG TCGACGACGT GCTGATGCGG
GCCGCCGAGA CGCTGTTCGC GATCCCCTTC CTCGTGCTGG TGCTGGCCTT CATCGCCGTC
TTCGGCCGCT CGCTGACCTT CATCGTCTTC GGCGTCGGCA TCGCGTCGAT CCCCACGTTC
GCCCGGCTGA TCCGCTCGCG CGTCGTCAGC ATTCGCGAGG AGGATTACAT CGAGGCGGCG
CAGGCCGCGG GCGTCCGGGA CCGCGACATC ATCTTCAGGC ACGTCATCCC GAACAGCTTC
ACGCCGGTGC TGGTCCAGGC GACGCTGCAG GTCGGCACCG CGATCCTGAT CGTCGCCGGG
CTCTCCTTTC TCGGGTTCGG CGTCCAGCCG CCCACTCCCT CGTGGGGACA GATGTTGGCG
GTCTCGCGCA ACTACATGAT CCCGAACCCG TGGTTCAGCG TCTGGCCGGG CCTGGCGATC
CTCGTCACGG TGGTCGGGTT CAACATCTTC GGCGACGGGC TCCGAGACGC CCTCGATCCG
CGCTTCAACA ACTAA
 
Protein sequence
MATIDESDSP TARDAVEEPG EEPAEIEARV GWRYTFSQIR SDPTAMTGLA IIAAVTAMAT 
FATIDSVLFE FLAGYRLFAQ FGVEKYWIAK TVWVSPVSES AATPRLLPPV GFENQFGAGS
WAHPLGTDDR GRDILLRLVY GSRIAVTVGL SATVVGFASG TVVGAVSGYY GDWVDDVLMR
AAETLFAIPF LVLVLAFIAV FGRSLTFIVF GVGIASIPTF ARLIRSRVVS IREEDYIEAA
QAAGVRDRDI IFRHVIPNSF TPVLVQATLQ VGTAILIVAG LSFLGFGVQP PTPSWGQMLA
VSRNYMIPNP WFSVWPGLAI LVTVVGFNIF GDGLRDALDP RFNN