Gene Hmuk_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1594 
Symbol 
ID8411116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1518844 
End bp1520169 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content68% 
IMG OID645019920 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003177415 
Protein GI257387642 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA CCGAGCGCCA GACCGCGACG GAGCCGACCG TCGCGTCCCG CGACGATCCC 
CTCTTGCGCG TCGAAGGGCT GACCAAGCAC TTCCCCAACG ACGAGGGGTT CCTCTCGTGG
TTGCAGCTGC GACCGGGCGA CGGCGACGGG CTGGTCGACC TCGGTCGAGA GTGGGTCCGG
GCCGTCGAGG ACGTGTCCTT CGAGATCTAC GAGGGCGAGA CGCTCGGGCT GGTCGGCGAA
TCGGGCTGTG GGAAGAGCAC GCTCGCGCGG ACGATCCTCC AGTTGATCGA ACCGACCGAC
GGCTCGGTGT ACTTCCGGGG CGAGGACCTC GCCGCCATGG ACGGGGAGAC GCTCCGGCGG
AACCGCCGCG ACATTCAGAT GATCTTTCAG GACCCACAGT CGTCGCTGGA CCCGCGCATG
AAGGTGGGCA AGATCGTCGA GGAGCCGATG CGCGCCCACG GGATGTACGA CGAGTCCGGG
CGAGAGGCCC GCGCCCGCGA ACTCCTGTCG AAGGTCGGTC TCGATCCACA GCACTACAAC
CGGTACCCAC ACGCGTTCTC GGGCGGCCAG CGCCAGCGCA TCAACCTCGC ACGGGCGCTG
TCGGTCAATC CGGACTTCGT CGTCTGTGAC GAGCCCGTCT CGGCGCTCGA CGTGTCCATC
CAGGCCCAGG TGCTCAACAC GATGCGCGAG CTTCAGGCGG AGTTCGGCCT CACCTACCTC
TTTATCGCGC ACGACCTGAG CGTCATCCGC CACATCTCCG ATCGGGTCGC GGTGATGTAC
CTCGGACAAC TGGTGGAACT CGCCGAGAAA GAGGAGCTGT TCGAGAACCC ACAGCACCCC
TACACGCGGG CGCTGCTGGA GTCGATTCCC GTGCCCGACC CCCGCGTCGA AGGGACCAGG
GGCGTCCTCG AAGGCGACGT ACCCAGCCCG ATCGAACCGC CGAGTGGCTG TCGCTTCCGG
ACGCGCTGTC CGGAGCTGAT CGCACCGTCG GCGTTCGAAC TGACCGACGA GGAGTGGGCG
CAGGTGCGAC AGTTCACTCG CTCGGTCACG CGCCACAGCT TCGAGCTGGC CGGGGCGAAC
GCCATCCGCG CGGAGTTTTT CGGCCCGCGG CTTCCCGACG GTGAGGCCGG CCGGATCGTC
TCACGCGCGA TCGATCTGCT CGTCGACGAT CGCTGGGACG AAGCCGCCGC CCTCCTGACG
GAGTCGTTTA CGGACCCCAG CATCTGTGCC CGAGAACGGC CACGCTACGA GGTGCCGGCC
GAGTACGGGA GCGGTCGTCA CGTCGCCGAG TGCCACCGAC ACCGGGAGGA CGGGAGCGGT
CGGTGA
 
Protein sequence
MSDTERQTAT EPTVASRDDP LLRVEGLTKH FPNDEGFLSW LQLRPGDGDG LVDLGREWVR 
AVEDVSFEIY EGETLGLVGE SGCGKSTLAR TILQLIEPTD GSVYFRGEDL AAMDGETLRR
NRRDIQMIFQ DPQSSLDPRM KVGKIVEEPM RAHGMYDESG REARARELLS KVGLDPQHYN
RYPHAFSGGQ RQRINLARAL SVNPDFVVCD EPVSALDVSI QAQVLNTMRE LQAEFGLTYL
FIAHDLSVIR HISDRVAVMY LGQLVELAEK EELFENPQHP YTRALLESIP VPDPRVEGTR
GVLEGDVPSP IEPPSGCRFR TRCPELIAPS AFELTDEEWA QVRQFTRSVT RHSFELAGAN
AIRAEFFGPR LPDGEAGRIV SRAIDLLVDD RWDEAAALLT ESFTDPSICA RERPRYEVPA
EYGSGRHVAE CHRHREDGSG R