Gene Hmuk_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1582 
Symbol 
ID8411104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1508235 
End bp1509038 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content65% 
IMG OID645019908 
Producttranscriptional regulator, TrmB 
Protein accessionYP_003177403 
Protein GI257387630 
COG category[K] Transcription 
COG ID[COG1378] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.353107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATC TGAGAGACCT CGGCCTCTCC GAGTACGAAG ATCGCGCCTT CCGGTCGCTG 
CTGGACACGG GACCCACAAC TGCAAAGGAG TTGTCACGCG CCAGCGACGT TCCGATGGGG
CGCATCTACG ACGTGCTCAA CAGCCTGGAG ACGTACAACC TCGTCCGCAG CCAGACGGCC
AGTCGGCCCA AAAAGTACGC GCCGGTCGAG CCCGACACCG CCCTGGAGCG GCTCCTGGAG
GACAAGAAAC GCCAGCTCGA CGAGAAGGCA AAGCAGTACG AGGAGATCGT CGACGAACTC
TCGAATCAAC TCGAATCCGC CGAACCGGTC GAGGAACCGT TCTGGACCGC CGCCGTCGGA
CCCGCCGAGA CCGTCGACCT CCTGGTCGAG CGGCTCTCGG CCGCCGACGA GCGAATCGTG
ATGGTGGGAT CGCTGCCCGG CCGGCAACTC GACCTGACCG AGGCGACCGA CCGGCTGGTC
GACGAACTGG AGCGTGCGCT CCAGCGCGGC GTCGAGGTGT ACATGCTCCT GCCGCCCTCC
TTCGTCGAGG CAGTCCCGGC AGACGTGGGT GAGTCTTACC AGCGACGCCT CCAGCAGTAC
GACAACTACC ACTACCGCAC CACGGAGGAG GTCACGTCGA CGTTCGAGCT GATCGACGAC
ATCGAGGTGT GCATCGAGGT GCCCCACCCA CTCGGAGGGT CGACGTTTGC CGTGATCGAT
CTGAAAGATC CGGAGTTCGC CGACGAGATC TACGCGGAGT TCGAGCCACG CTGGCAGCGG
GCCAGAGAGA TCGTCGGGGA CTGA
 
Protein sequence
MANLRDLGLS EYEDRAFRSL LDTGPTTAKE LSRASDVPMG RIYDVLNSLE TYNLVRSQTA 
SRPKKYAPVE PDTALERLLE DKKRQLDEKA KQYEEIVDEL SNQLESAEPV EEPFWTAAVG
PAETVDLLVE RLSAADERIV MVGSLPGRQL DLTEATDRLV DELERALQRG VEVYMLLPPS
FVEAVPADVG ESYQRRLQQY DNYHYRTTEE VTSTFELIDD IEVCIEVPHP LGGSTFAVID
LKDPEFADEI YAEFEPRWQR AREIVGD