Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1568 |
Symbol | |
ID | 8411089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1494935 |
End bp | 1495546 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645019893 |
Product | Isopentenyl-diphosphate Delta-isomerase |
Protein accession | YP_003177389 |
Protein GI | 257387616 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1443] Isopentenyldiphosphate isomerase |
TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.331903 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CAGCCGAAGG GAGTAAGGGC GACTCCGCCG ATACGCCTGG CATGGACGAC GTGGAACACG AGAACGCTCT CCAGGACGTG ATCACCGTCG ACGCGAACGA CGAGAAACAG GGGACGGCCA ACCGTCTCGA CGCCCACACG GGCGACGGCA TCCGCCACCG CGCGTTCACG GCGCTGTTGT TCGACGAGGA GGGGCGGATA CTGCTCGCCC AGCGCGCCCA CGACAAGCGT CTGTGGGACA CTCACTGGGA CGGCACCGTT GCGTCCCACC CGGTCGAGGG CCAGAGCCAG GAGGAAGCGA CCCGCCAGCG CCTCGAAGAG GAACTCGGGA TTACGCCCGA CCAGTACGGC GATCTCCAGA AAACAGACCG CTTCGAGTAC AAGCGCTACT ACGAGAACGC CGGCGTCGAG TGGGAGGTCT GTACAGTTCT GCAGGCGACG CTGACCGACA CCTCGCTGGA CCGAGACCCC GAGGAGGTCG GGGGTCTGCT CTGGGTGTCT TACGAGGACC TACAGGAGAA CCCGAAGTTC TACCGACAGC TCCGCCTGTG TCCGTGGTTC GAAATCGCGA TGCGGCGAGA TAGCGAGACC GACGGCGAGT AA
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Protein sequence | MSDTAEGSKG DSADTPGMDD VEHENALQDV ITVDANDEKQ GTANRLDAHT GDGIRHRAFT ALLFDEEGRI LLAQRAHDKR LWDTHWDGTV ASHPVEGQSQ EEATRQRLEE ELGITPDQYG DLQKTDRFEY KRYYENAGVE WEVCTVLQAT LTDTSLDRDP EEVGGLLWVS YEDLQENPKF YRQLRLCPWF EIAMRRDSET DGE
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