Gene Hmuk_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1568 
Symbol 
ID8411089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1494935 
End bp1495546 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID645019893 
ProductIsopentenyl-diphosphate Delta-isomerase 
Protein accessionYP_003177389 
Protein GI257387616 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID[TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.331903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CAGCCGAAGG GAGTAAGGGC GACTCCGCCG ATACGCCTGG CATGGACGAC 
GTGGAACACG AGAACGCTCT CCAGGACGTG ATCACCGTCG ACGCGAACGA CGAGAAACAG
GGGACGGCCA ACCGTCTCGA CGCCCACACG GGCGACGGCA TCCGCCACCG CGCGTTCACG
GCGCTGTTGT TCGACGAGGA GGGGCGGATA CTGCTCGCCC AGCGCGCCCA CGACAAGCGT
CTGTGGGACA CTCACTGGGA CGGCACCGTT GCGTCCCACC CGGTCGAGGG CCAGAGCCAG
GAGGAAGCGA CCCGCCAGCG CCTCGAAGAG GAACTCGGGA TTACGCCCGA CCAGTACGGC
GATCTCCAGA AAACAGACCG CTTCGAGTAC AAGCGCTACT ACGAGAACGC CGGCGTCGAG
TGGGAGGTCT GTACAGTTCT GCAGGCGACG CTGACCGACA CCTCGCTGGA CCGAGACCCC
GAGGAGGTCG GGGGTCTGCT CTGGGTGTCT TACGAGGACC TACAGGAGAA CCCGAAGTTC
TACCGACAGC TCCGCCTGTG TCCGTGGTTC GAAATCGCGA TGCGGCGAGA TAGCGAGACC
GACGGCGAGT AA
 
Protein sequence
MSDTAEGSKG DSADTPGMDD VEHENALQDV ITVDANDEKQ GTANRLDAHT GDGIRHRAFT 
ALLFDEEGRI LLAQRAHDKR LWDTHWDGTV ASHPVEGQSQ EEATRQRLEE ELGITPDQYG
DLQKTDRFEY KRYYENAGVE WEVCTVLQAT LTDTSLDRDP EEVGGLLWVS YEDLQENPKF
YRQLRLCPWF EIAMRRDSET DGE