Gene Hmuk_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1563 
Symbol 
ID8411084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1491751 
End bp1492431 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID645019889 
Productcytoplasmic chaperone TorD family protein 
Protein accessionYP_003177385 
Protein GI257387612 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.548826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.822991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC ACAACGACGA CGCTGGATCG GTCGTGGCCG ATCGCGTCGG CGGCGACCCA 
GCGGAGACGG CCCGCGAGAT AGACGCGCGG GTCTACCGGG TGCTGGGCGA GCAGTTCCTG
GCCCGCCCCG GCCGCGAACG GGCCGACGCC GTGGGGATCT GGGCCAGCGA GTGGCGCTGC
AACGCCGAGC GCCTCCCGCC GGAGTTCGAC GCGGCGCTGG ACCGGATCGA GGACGGTGCG
ACCGCCGACG CGGAGACGCT TCGGACGGCA TACACCCACC TCTTCCGGGG CGTCTCCGAG
CGCGCGCCCG ATCCGCCGTA CGAGTCGATG TACCTCGACG GGAGCTTCTA CAGCGGGACG
ACCACCGAGA TCCGGAAGGG CTACCGCTGG GCCGGGTTCG ACGTGGACGA CACCCACGGC
AACGAGCCCC CGGACCACCT GGGGCTCGAA CTCCAGTTCC TCGGCGAGCT GGTCGCGATG
GACGACGGCG ACAGGGACCC CGACGAGCCC GACACCGAGG ACGCGCTGTG GTGGCTGCTG
GACGAACACC TGACCGAGTG GCTGCCGGCC TACCACGCCC GCCTCCAGCG CGAGGGCCCA
CACGAGTACT ACGCGGGACT GCTCGATCTG GCGCTGGCGG TCGTCACCAG CCATCACAAA
CGACTCGCGG AGGACAGATG A
 
Protein sequence
MSDHNDDAGS VVADRVGGDP AETAREIDAR VYRVLGEQFL ARPGRERADA VGIWASEWRC 
NAERLPPEFD AALDRIEDGA TADAETLRTA YTHLFRGVSE RAPDPPYESM YLDGSFYSGT
TTEIRKGYRW AGFDVDDTHG NEPPDHLGLE LQFLGELVAM DDGDRDPDEP DTEDALWWLL
DEHLTEWLPA YHARLQREGP HEYYAGLLDL ALAVVTSHHK RLAEDR