Gene Hmuk_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1562 
Symbol 
ID8411083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1490447 
End bp1491754 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID645019888 
ProductPolysulphide reductase NrfD 
Protein accessionYP_003177384 
Protein GI257387611 
COG category[C] Energy production and conversion 
COG ID[COG5557] Polysulphide reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.382538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.988263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC CATCCGCGCG GACGCGACTG ACCGAACCGT TCGAGGACAC CGGCAGGCTC 
TACTACGCCA TGGTCGGCGT CGCGGTCCTG CTCGTCCTCG GTATGGTGTA TAGCTTCGTG
ACCGTCCTCA CGCAGGGTCA CGCCGTCACC GGCCTGGACA ACTGGGGGAC CGACGCTGGC
GTCCCCTGGG GGCTGGACAT CGGCGCGTTC ACCTGGTGGG CCCTGATGGG CGTCGGCGCG
ATCGCGCTGT CGGCGATCGT CCGGGTCTTC CGGATGGACG AGTACGAGCC CTACGCCCGG
ATCGGGGAAC TCGTGACGCC GCTTGCCTTC ATGGCGAGCT TCCTGCACAT CCTCTTCGAC
CTGGGCCAGC CGTTCCGGGT GTTGAACACG CTGCTGTACC TCCCACTGGA GTCCCCGATC
GCCTGGGACG TCATCCTGCT GGCCGGACTG GGCCTGCTCT CGATCGCGTA CCTACTCGTG
TCGATCCGCC GGGACCTCCA CGAGCTGTAC CACGACGGCG TGCTCCCGTC GGTCCTCTCG
CCGGTCTACG AGGCGCTGCT GATCGGCTAC GAGGCACCGA CCGACAGTGA GGGACGGGGC
CTGCGCTGGT GGCTCGCCGC CGGCGTGCTG ACCTTCATCC CGGTGGTCGG CGGCGGTCTC
GTCCCGTTCG TCTGGGGTCC CTTCGGCGTG AACATCAACT GGTTCGGGGC GATCCAGGGA
CCGACGTTCC TCGCGGGGAG CATGACCGTC GGTGCCGCGA CGCTCCTGTT CGTCGGCGGA
ATCCTGCGGT TCGCCTACGA CCTCGACGAC GTGTTCACCG ACGAGACGCT CCGGACCTTC
GGCGTATTCA CCGGCGCGTT CGCGTTCACG TACATGCTGG GCGTCTTCTA CGAGGTCCAG
ACGGGGACGT TCGCAGCCGA CATGGCTGAC CCGAACATCT CGACGCTGGT CTTCCAGGGT
CCGCTCGCGT CGCTGCTGTG GCTCGCCGTT GCGGCCGTCG TCCTCCCGAC GATCTACCTC
GTGGTCCAGC AGGCGATCGG TCGGTTCAGC CTCCTCGGGA CGGTCGTCTT CGCCGGCGTG
ATGCTCGTCG GCGTCCTCCA CCAGGAGACG TGGCTCACCG TCGGCGGCCT GATGTACCCC
GATCTGATGT ATCCGGTCGG CGAGTACACG CCCTCGATCT ACGAGTGGCT GAACCTGATG
GGGACGACGG CGCTGGTCGC GCTCGGACTG CTCGTGTTCG CCAAGACGCT CCCGGTCGTC
GCAACGAACG GCGTCGAATC AACTGACGGA GTCGAGTCAA ACCGATGA
 
Protein sequence
MSTPSARTRL TEPFEDTGRL YYAMVGVAVL LVLGMVYSFV TVLTQGHAVT GLDNWGTDAG 
VPWGLDIGAF TWWALMGVGA IALSAIVRVF RMDEYEPYAR IGELVTPLAF MASFLHILFD
LGQPFRVLNT LLYLPLESPI AWDVILLAGL GLLSIAYLLV SIRRDLHELY HDGVLPSVLS
PVYEALLIGY EAPTDSEGRG LRWWLAAGVL TFIPVVGGGL VPFVWGPFGV NINWFGAIQG
PTFLAGSMTV GAATLLFVGG ILRFAYDLDD VFTDETLRTF GVFTGAFAFT YMLGVFYEVQ
TGTFAADMAD PNISTLVFQG PLASLLWLAV AAVVLPTIYL VVQQAIGRFS LLGTVVFAGV
MLVGVLHQET WLTVGGLMYP DLMYPVGEYT PSIYEWLNLM GTTALVALGL LVFAKTLPVV
ATNGVESTDG VESNR