Gene Hmuk_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1561 
Symbol 
ID8411082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1489575 
End bp1490450 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content66% 
IMG OID645019887 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003177383 
Protein GI257387610 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.58558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.932049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAC TCGGCATGGC GATCGACCTG GAGCGGTGTT ACGGCTGCCG GGCCTGCATG 
GAGGCCTGCA AGGTCGAGAA CAGCACGCCG CGCGGGGCGT TCTGGATGCA CGTCTTCCGC
TACGAGGAAG GCGAGTACCC GAACACCGAG CAGACGAACA TGCCCCGGCC GTGCCAGCAC
TGTTCGGAGC CCTCGTGTGC CTCGGCGTGC CCGACGAGCG CGCGGTTCAA ACGCGAGGAG
GACGGGATCG TCCTCACCGA CTACGACCGC TGTATCGGCT GCCGGTACTG CGAGATCGGC
TGTCCGTACG GCGTCAACTA CGCGCAGTTC CAGCATCCCG ACGAGGCCCA GTACGGCTAC
GGTCACTCGG AAAGTGCCGG CGACGACACG TTCGGCTCGG GCAGCCTCGC CGAGGCACTG
GGCGAGGAGG ACCCGGGCAG TGGCAAACCG CCGTGGCACG ACCCGATCCA CGACGAGCCG
GTCGAGCCGC GCGGCACGCA GATGTCCGGG CCACAGCCCG AGGGCGTGAT GAGCAAGTGT
ACGATGTGTG TCCATCGGCA GGACAACGAA GAGCGCGGCG AGCAGGGGAC GACGGCCTGT
CAACAGACCT GTCCCGTCGA CGCCATCAAG TTCGGCGACA TGGAGGACCC CGAGAGCGAA
CCCCGGCAGC ACCTCCGGGA GAAGTCCTCC TCGTCGACGT TCAAGCTGCT TGAGGATCGC
GGGACCGAAC CGAACATCGT CTACATCGGC GACGAGCCGA GTGACGACGC CCGCGCGATC
GAGGACGCGG AATCATTCAA GGACCCCGAG GAAGCCATCG AGGTCGAGCA GAACCCACCT
GAGACTCGCT CGACTGACGT GGAGGTGAAC CAATGA
 
Protein sequence
MTQLGMAIDL ERCYGCRACM EACKVENSTP RGAFWMHVFR YEEGEYPNTE QTNMPRPCQH 
CSEPSCASAC PTSARFKREE DGIVLTDYDR CIGCRYCEIG CPYGVNYAQF QHPDEAQYGY
GHSESAGDDT FGSGSLAEAL GEEDPGSGKP PWHDPIHDEP VEPRGTQMSG PQPEGVMSKC
TMCVHRQDNE ERGEQGTTAC QQTCPVDAIK FGDMEDPESE PRQHLREKSS SSTFKLLEDR
GTEPNIVYIG DEPSDDARAI EDAESFKDPE EAIEVEQNPP ETRSTDVEVN Q