Gene Hmuk_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1549 
Symbol 
ID8411070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1478950 
End bp1479144 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content58% 
IMG OID645019875 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_003177371 
Protein GI257387598 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG GTACGGTTGA CTTCTTCAAC GACACTGGCG GTTACGGGTT TATCGACACA 
GAAGACGCCG ACGAGGACGT CTTCTTCCAC ATGGAAGACA TCGGCGGTCC TGACCTCGAA
GAGGGCCAGG AAGTCGAGTT CGACATCGTG CAAGCGGACA AGGGTCCGCG TGCGGAAAAC
CTCACCCGGC TGTGA
 
Protein sequence
MATGTVDFFN DTGGYGFIDT EDADEDVFFH MEDIGGPDLE EGQEVEFDIV QADKGPRAEN 
LTRL