Gene Hmuk_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1533 
Symbol 
ID8411054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1459808 
End bp1460782 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content71% 
IMG OID645019859 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003177355 
Protein GI257387582 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGCA GCCGCAGAAC GCTCGTGTCG TTCGCGGTCG CGAGCGTCCT CTTCGGGGGG 
ACGTTCGTCG CCGCGAAGGC GGGACTGGAC TACTTCCCGC CCCTGCTGTT CGTCGCCCTG
CGCTTCGACG TGGCGTCGGT CGTCCTGATC GGCTACGCCG TCGCGACGAC GCCCCGCGAG
GCACTCCTGC CGCGCACTCG CGGCGACGTG GTGGGCATCG TCGCCACCGG GATCTTCGCC
ATCGGGCTGA CCAACGCGCT GCTGTTCGTC GGCCAGCAGT ACGCCACCAG TGCCGTCGGT
TCGATCGTCT TCAGCCTCAA CCCGATCCTG ACGCCGGTGT TCGCGGCAGT CCTGTTGGCC
GACGATCGGC TCTCGGCTCG GGGCAGCGCC GGGATGATCC TCGGCCTGCT CGGCGTCGGA
CTGGTCGTCA GCCCCGACCC GGCGAACCTC CTCGCCGGTG GGTTCGGCAA GGCGATCCTC
TTTGCCGGTG CGGTCAGCGG CGCGCTTGGC AGCGTGCTCA TCCGCTGGGC CGACGGAGAG
CTGTCCAGCA GCGTCCGCAC TGCCTGGGGA CTCCCCCTCG GTGCCGGCCT CACGCACGCC
CTGAGCCGTG CTGCCGGCGA ATCCGTCGGC GCGATCACCT GGAGCGGCGA GGCGCTGCTG
GCGCTTGGCT ACGTCGGGGT CTTCGCCGGT GCGATCGCCT ACATCGCCTA CTTCGAGCTA
CTGGACACGG CCGGGCCGAT CCGTGCGAAC CTCGTGTTCT ACGTCGTCCC GGTCGTCGCG
ACGCTGGGCG GGTGGGCGCT GCTCGACGAG ACGATCGCAC CGACTGCCGT CGCCGGCTTC
CTGACGATCT TCGCCGGCTT CGCCGTGCTC GGAAGCCAGT CCGTCGACGC CACGGCGGTC
CGCCGCCGCG TTCCGGGTCT CCGGCCGAAC GACCCCCCGG TCCGAACCGA GCCAAACGGC
TTCGAGTCCG ACTGA
 
Protein sequence
MNGSRRTLVS FAVASVLFGG TFVAAKAGLD YFPPLLFVAL RFDVASVVLI GYAVATTPRE 
ALLPRTRGDV VGIVATGIFA IGLTNALLFV GQQYATSAVG SIVFSLNPIL TPVFAAVLLA
DDRLSARGSA GMILGLLGVG LVVSPDPANL LAGGFGKAIL FAGAVSGALG SVLIRWADGE
LSSSVRTAWG LPLGAGLTHA LSRAAGESVG AITWSGEALL ALGYVGVFAG AIAYIAYFEL
LDTAGPIRAN LVFYVVPVVA TLGGWALLDE TIAPTAVAGF LTIFAGFAVL GSQSVDATAV
RRRVPGLRPN DPPVRTEPNG FESD