Gene Hmuk_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1527 
Symbol 
ID8411048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1451944 
End bp1452669 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content69% 
IMG OID645019853 
ProductS-methyl-5-thioadenosine phosphorylase 
Protein accessionYP_003177349 
Protein GI257387576 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2820] Uridine phosphorylase 
TIGRFAM ID[TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC AGCCCCACCT GCTCGTCGAG GACGGCGATC TGAACGACAT CGCGCTCGTT 
CCCGGCGATC CGGGCCGCGT CGACCGGATC GCCGCCCAGT GTGACGAGGC GACGACGGTC
GCCCGGAACC GCGAGTACAA GGTCGTCAAC GCGACCTACG AGGGTTGCGA CCTGACGATC
TGCTCGACCG GCATCGGCTC GCCGTCGGCG GCGATCGCGA TCGAGGAACT CCACGCCGTC
GGGGTCGAGA CGGTCATCCG GGTCGGCACG ACGGGCGCGC TCCAGTCCGA CATCGAGATC
GGCGACATGG TCGTCGCCAC GGGCGCGGCC AAAGACGAGG GGACGACCGA GCGATACGAG
GCCGAGACGG TGCCGGCCGT GCCGGACTAC GCGGTGCTGT CGGCGCTGGT CGAGGCCGCC
GAGGCCAACG GCGAGTCCGT CCACGTCGGT CCGATCGCGA CGGACGACGC CTTCTACGCC
GAGACCGACG AGTACGTTTC GGCGTGGGAA GCGGCGGGCC TGCTGGCCGT CGAGATGGAG
GCCGCCGCGC TGTTCTCGCT GGCCCGTCGC AAGGGGATGG CCGCTGGCGC GATCTGTACC
GTCGACGGCA ACCTCGTCGA GGGGACCCAG AAGGGCGAGA CCGACGACGA GGAACTGCCC
GAGAAGGCAA AGAACAACGT CGAGCGAGCG ATCACGCTGG CACTGGAGAC GGCCGCGTCG
CTGTAG
 
Protein sequence
MAKQPHLLVE DGDLNDIALV PGDPGRVDRI AAQCDEATTV ARNREYKVVN ATYEGCDLTI 
CSTGIGSPSA AIAIEELHAV GVETVIRVGT TGALQSDIEI GDMVVATGAA KDEGTTERYE
AETVPAVPDY AVLSALVEAA EANGESVHVG PIATDDAFYA ETDEYVSAWE AAGLLAVEME
AAALFSLARR KGMAAGAICT VDGNLVEGTQ KGETDDEELP EKAKNNVERA ITLALETAAS
L