Gene Hmuk_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1519 
Symbol 
ID8411040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1445337 
End bp1446476 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content67% 
IMG OID645019845 
Productprotein of unknown function DUF214 
Protein accessionYP_003177341 
Protein GI257387568 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGA GCCCGCTCGC GCGGTTCTCG CCGTTCCTGG CGTTCGCCCG GAACAACCTC 
TCGCGGGCAC GCGCTCGGAC GATCCTCGCG ATGGCGGGGA TCACGATCGG CGTGGTCGCG
ATCGCCTCGC TGGGGATGTT CGGAGCCACG CTCGAACAGT CGTTTCTCGA CACGTCCGAC
GACGCGATCC GGACCGTCGC CGTCGGTCCC GGCGAAGACT CGGAGTTCGG GTTGCTCCGT
CGGGAACAGG TCGCCGAGAT CGAACGCTAC GCCGGTAACG GCGATGTCTA CACGCTCACC
CGCGGCCGGG GGGAAGTGAC CGGATTACAG GAGACGACGA GCGCCTCGCT GGTGTCGCTC
TCAGATCCAG AGGTGTTCGT CACCGCGGAG TCGGGCCAGA TCCCGCAGAA CTGGCGCTCT
GGTGTCGCGA TCGGGAACGA ACTGGCGGAG ACGCTCGGCG TCCAACCCGG GGACAGCGTG
CAGGTCGACG GCGAGAGCCG GCGCGTCGTC GCCGTGCTGG CCGAGTCGAG CCGCGCCTCG
TTCGTCTCGA CGGGCGATGC CGTCGTCCTG CCGCCGGGCG AACTCGGTGA CGGCGCGTCG
CAGGTCCTCA TCCGAGGGGA GACGCCCCAG CAGGCGTTCG CCATCAGCGA TCGGATCGAC
GAGAACCTCA ACAGCGACCG CCGGACTCGT TACAGCGTCT TCGACGCCGA GTCCGCCCTC
GAACAGTTCA ACCAGCAGAT CGGCCTCATC CGGACGTTCC TGCTCGCTGT CGGCGGGATC
TCGCTGCTGG TCGCGTCCGT GAGCATCCTC AACGTGATGC TCATGAGCAC GATCGAGCGC
AAAGAGGAGA TCGGCGTCCT CCGGGCGGTC GGCTACCACC GCCTCGACAT CGTCAAGCTG
ATGCTGTACG AAGCGGCGCT GCTGGGCGTC GTCGGCTCGA TCTTCGGCGT GCTCATCAGC
GTCGGCCTGG GGATGGTGAT GAACGCGCAG CTCCTCTCGG ACCCCCTCGC CTTCTCCGGG
CAAGCCCTGC AGTACACGGT GCTTGGCTTC CTCTTCGGGA CGGGTGCCAG CTTCCTCAGC
GGCCTCTATC CCGCCTGGAA AGCGGCTAAC GCCCGTCCGG TCGAGGCACT CCGGGACTGA
 
Protein sequence
MIESPLARFS PFLAFARNNL SRARARTILA MAGITIGVVA IASLGMFGAT LEQSFLDTSD 
DAIRTVAVGP GEDSEFGLLR REQVAEIERY AGNGDVYTLT RGRGEVTGLQ ETTSASLVSL
SDPEVFVTAE SGQIPQNWRS GVAIGNELAE TLGVQPGDSV QVDGESRRVV AVLAESSRAS
FVSTGDAVVL PPGELGDGAS QVLIRGETPQ QAFAISDRID ENLNSDRRTR YSVFDAESAL
EQFNQQIGLI RTFLLAVGGI SLLVASVSIL NVMLMSTIER KEEIGVLRAV GYHRLDIVKL
MLYEAALLGV VGSIFGVLIS VGLGMVMNAQ LLSDPLAFSG QALQYTVLGF LFGTGASFLS
GLYPAWKAAN ARPVEALRD