Gene Hmuk_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1512 
Symbol 
ID8411033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1439259 
End bp1440977 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content67% 
IMG OID645019838 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003177334 
Protein GI257387561 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.578551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.8402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCATTC AGTTGGCTGG TGACCTCACC TACGCGGGCT ATCTCCTGGT GTTCGCTGTG 
GCAACACTGG CCTGCTTCGT GAGCATCGAC CGGGTCCAAC AGCTCGAAGA GCCGGGCACG
CGGCGTGGAC TGACGGCGCT GCTCCTGGCC AGCGGCGGCT GGGCGCTCTC GTATCTGGGC
TACTTCCTCG TGCCAGACCC CCAGCTCAAA ACCGCGTTCT ACGTCGCCGG CCTCGTCGTC
GGCCTCGCGA CGGTCGGTGC GTGGCTCTAC TTCTGCTCGG CTTTCACCGG TCGGACGCTG
CATCGCAGCA CCGGTCTACG ACGCGCGGCC GTCGCGATCT TCCTTGCGAT CGTCGCCGTG
AAAGTCACGA ACTATCACGG CCTGTACTTC GCGACCCGGA CAGCGACGGA ACCGTTCCCA
CACATGGCGG TGACACACGA GCCGCTGCAC TGGGTCGTCG TCGGACTCTG CTACGCGCTG
ACGGCCGTCG GATACTTCAT GCTCTTCGAG CGGCTCCGAC AGGTCAGCTA CCAGACGTGG
TCTTTCGGCC TCCTCGTCGG GGTGACGGCT GTTCCTCTCC TGCTCAACCT CGTGGGCCAC
GCGACCCCGC TGCTCGCCGA CGTGAGCCAC GAACCCCTCG GTGTCGCGGT CTTCGCCGTC
GGCGTCTCGT TCGTCTTCCA CGAGCGGTTT CAGGCGATCG GGCTCGCGGA GGGAGACGAC
AAGCCCATCG TCATCGTGAA CGAACGCGAT CAGCTCCGCG AGTACAACGC GGCGGCGGCC
GACCTCTTTC CCGCGCTCAC CCGGCCGGAC GTGATCGGGA AACCGCTGTG GAGCGTCGTT
CCGTCCGTCG CCGAGGTGCT CGACTCCGAG TCGGGCGTAT TGTCCGTTCG TGACGGCGAG
GAAACCCGAT ACTACCAGCT CACCGAGAGC CCGTTCGCGG CCGGACGGTC ACCGGTCGGT
CGGCTCGTGC TCTTTACCGA CATCACGGAG CGCGAACGCG ACCGACGCGA ACTCCAGCGC
CAGAACGAGC GCCTCGAAGA GTTCGCCAGC GTCGTCTCTC ACGACCTCCG GAACCCCTTG
CAGGTCTTGC GGGGCGCGTT CGAGGGGGCT CGCGAGACCG GCGACCCCTC GCACTTCGAC
CGCGGGGAGC GAGCGCTCGA CCGGATGGAG ACGCTCATCG ACGACGTGCT CTCGCTCGCC
CGGCAGGGCC AGCCCATCGA CGAGACCGAA CCGATCTCGC TCGCGTCGCT GGCGGCGTCG
TGCTGGGAGG TCATCGAGGC CGGCGACGCC GATCTCGTCG TCGAAACCGA TCTCGATCTC
GTCGCCGATC CCGACCGCTT CCGTCAACTG CTGGAGAACC TCTTTCGGAA CGCGGTCGAA
CACGGCGGTG ACGACGTGAC CGTTCGAGTC GGGCGACTAC CGGACGGCAA CGGATTCTAC
CTCGCAGACG ACGGTCCCGG CATCCCGGTC GACGAGCGCG AGGCGGTGTT CGAGTCCGGC
TACTCGACGA CCGACGGGGG GACCGGCTTC GGACTGGCGA TCGTCAGCGA GATCGTCGAC
GCCCACGGCT GGGAGATCAC GGTGTCGGGG CGAGCGGCCG ACGACGCCCC CGACGGACAC
ACGGACTCGG AATCCGGTTC GAGAACGGCC ACCGGTGCCT CCTTCGAGAT CACTGGGATC
GGTTCTCCAG ACGGCGTCGA CGCGAGCGAA GCGGCTTAG
 
Protein sequence
MIIQLAGDLT YAGYLLVFAV ATLACFVSID RVQQLEEPGT RRGLTALLLA SGGWALSYLG 
YFLVPDPQLK TAFYVAGLVV GLATVGAWLY FCSAFTGRTL HRSTGLRRAA VAIFLAIVAV
KVTNYHGLYF ATRTATEPFP HMAVTHEPLH WVVVGLCYAL TAVGYFMLFE RLRQVSYQTW
SFGLLVGVTA VPLLLNLVGH ATPLLADVSH EPLGVAVFAV GVSFVFHERF QAIGLAEGDD
KPIVIVNERD QLREYNAAAA DLFPALTRPD VIGKPLWSVV PSVAEVLDSE SGVLSVRDGE
ETRYYQLTES PFAAGRSPVG RLVLFTDITE RERDRRELQR QNERLEEFAS VVSHDLRNPL
QVLRGAFEGA RETGDPSHFD RGERALDRME TLIDDVLSLA RQGQPIDETE PISLASLAAS
CWEVIEAGDA DLVVETDLDL VADPDRFRQL LENLFRNAVE HGGDDVTVRV GRLPDGNGFY
LADDGPGIPV DEREAVFESG YSTTDGGTGF GLAIVSEIVD AHGWEITVSG RAADDAPDGH
TDSESGSRTA TGASFEITGI GSPDGVDASE AA