Gene Hmuk_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1493 
Symbol 
ID8411014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1418596 
End bp1420041 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content67% 
IMG OID645019819 
ProductLysozyme 
Protein accessionYP_003177315 
Protein GI257387542 
COG category[R] General function prediction only 
COG ID[COG3979] Uncharacterized protein contain chitin-binding domain type 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.72016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGAC GGACGTACGT ACGATCACTG TCGGCGCTCG TGGGGCTCAC GGGCGTCGGC 
GCGGCATCGG CACAGCAAGA GTACCCGACG TGGGATGCGA GCGCGACCTA CACGGAGGGT
GACCGGGTCG TCTACGAGGG GACGATCTAC GAGGCCCAGT GGTGGACACA GGGCGACGAA
CCCGGTAGCA CCCAGTGGGG ACCGTGGACC GTCGTCGACT CTTCGGACGG TGGCTCCGAC
GGGGGGAGTG ACGGAGGTAG CGACGACGGG AGCGACGACG GCACGGACGG TGGCAGTGGG
GAGACCGACT ATCCGGCCTG GGACGCCGGC ACCACGTACA CCGGCGGCGA TCGGGTCGTC
TACGAGGGGA CGATCTACGA GGCCCAGTGG TGGACTCGGG GAGACGAGCC CGACGCCGGT
GGACCGTGGG ACGAAGTCGG TCCCGCAGAC GGTGGCGGTG GGGACGACGG CAGCGGTGAC
GACGACAGCG ACGATTCAGA CGGGGGCACG GGCACACCGG GCGCGATCCC GGAGAACGTC
TTCGCCCCGT TCGTCGACGT GGCACTGGAC GACCAGCAGG CGCTCACCGA CGCGGTCTCG
AACGCCGGAA CGAAGTACTT CACGCTCGCG TTCGTCAACT CCGCCGGGGG CGAGCCGGCG
TGGGCCGGCG ACTCGAACCT GATCGTCGGC GAGAGCGGAG CACGCCTCGA CATGCAGGGC
CAGATCGCCG ATCTCAGGGC CGACCACGGC GGCGAGGTCG TCGTCTCCTT TGGCGGTCTC
AGTGGCACGT ACCTCGCGGA GGCGGTGACG AGCGCGAGCA CGCTCAAAGA GAAGTACGCG
ACCGTCGTCG ATCGGCTCGA CGCGCAGTTC ATCGACTTCG ACGAGGAACA ACACATCCGG
GACAATCCGG AAGTCATCGA GCGTCGGAAC GAGGCACTCG CTCTGCTCCA GGAGGAGTAC
CCGGAGCTGT CGATCTCGTA CACGCTGCCG GTGATGCCCA GCGGGCTCCC CGAGCAATCG
AGCAACGACG TGCTGTTCGT GCTCGAAGAC GCGGCCCAGC GCGGCGTCGA ACTCGACGCC
GTGAACCTCA TGACGATGAA CTACGGCTCG GCGTTCGAAC TGAACGGCGA GACCGTCGTC
GACGCCGCCG AGAGCGTCCA CGGACAGCTG GCCGACATCT ATCCGGAGCG GTCGGCCGCC
GAGCGCTGGA ACGCGATCGG CCTGACGCCG ATGATCGGCC AGAACGACGT GGACTCGAAC
GTGTTCTACC CCGAGGACGC ACAGACGGTG CTCGATTTCG CCCAGGAGAA GAACCTCCGG
TGGCTGTCGT TCTGGGAGCT CGTCCGCGAC AACGGCGAGG GGAGCGCGCT CTACGAGAGC
AGCCAGATCG ATCAGGAACC CTACGAGTTC TCGTCGATCT TCGACGAGTT CACGAGCGAC
AGCTGA
 
Protein sequence
MRRRTYVRSL SALVGLTGVG AASAQQEYPT WDASATYTEG DRVVYEGTIY EAQWWTQGDE 
PGSTQWGPWT VVDSSDGGSD GGSDGGSDDG SDDGTDGGSG ETDYPAWDAG TTYTGGDRVV
YEGTIYEAQW WTRGDEPDAG GPWDEVGPAD GGGGDDGSGD DDSDDSDGGT GTPGAIPENV
FAPFVDVALD DQQALTDAVS NAGTKYFTLA FVNSAGGEPA WAGDSNLIVG ESGARLDMQG
QIADLRADHG GEVVVSFGGL SGTYLAEAVT SASTLKEKYA TVVDRLDAQF IDFDEEQHIR
DNPEVIERRN EALALLQEEY PELSISYTLP VMPSGLPEQS SNDVLFVLED AAQRGVELDA
VNLMTMNYGS AFELNGETVV DAAESVHGQL ADIYPERSAA ERWNAIGLTP MIGQNDVDSN
VFYPEDAQTV LDFAQEKNLR WLSFWELVRD NGEGSALYES SQIDQEPYEF SSIFDEFTSD
S