Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1493 |
Symbol | |
ID | 8411014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1418596 |
End bp | 1420041 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645019819 |
Product | Lysozyme |
Protein accession | YP_003177315 |
Protein GI | 257387542 |
COG category | [R] General function prediction only |
COG ID | [COG3979] Uncharacterized protein contain chitin-binding domain type 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.72016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGAC GGACGTACGT ACGATCACTG TCGGCGCTCG TGGGGCTCAC GGGCGTCGGC GCGGCATCGG CACAGCAAGA GTACCCGACG TGGGATGCGA GCGCGACCTA CACGGAGGGT GACCGGGTCG TCTACGAGGG GACGATCTAC GAGGCCCAGT GGTGGACACA GGGCGACGAA CCCGGTAGCA CCCAGTGGGG ACCGTGGACC GTCGTCGACT CTTCGGACGG TGGCTCCGAC GGGGGGAGTG ACGGAGGTAG CGACGACGGG AGCGACGACG GCACGGACGG TGGCAGTGGG GAGACCGACT ATCCGGCCTG GGACGCCGGC ACCACGTACA CCGGCGGCGA TCGGGTCGTC TACGAGGGGA CGATCTACGA GGCCCAGTGG TGGACTCGGG GAGACGAGCC CGACGCCGGT GGACCGTGGG ACGAAGTCGG TCCCGCAGAC GGTGGCGGTG GGGACGACGG CAGCGGTGAC GACGACAGCG ACGATTCAGA CGGGGGCACG GGCACACCGG GCGCGATCCC GGAGAACGTC TTCGCCCCGT TCGTCGACGT GGCACTGGAC GACCAGCAGG CGCTCACCGA CGCGGTCTCG AACGCCGGAA CGAAGTACTT CACGCTCGCG TTCGTCAACT CCGCCGGGGG CGAGCCGGCG TGGGCCGGCG ACTCGAACCT GATCGTCGGC GAGAGCGGAG CACGCCTCGA CATGCAGGGC CAGATCGCCG ATCTCAGGGC CGACCACGGC GGCGAGGTCG TCGTCTCCTT TGGCGGTCTC AGTGGCACGT ACCTCGCGGA GGCGGTGACG AGCGCGAGCA CGCTCAAAGA GAAGTACGCG ACCGTCGTCG ATCGGCTCGA CGCGCAGTTC ATCGACTTCG ACGAGGAACA ACACATCCGG GACAATCCGG AAGTCATCGA GCGTCGGAAC GAGGCACTCG CTCTGCTCCA GGAGGAGTAC CCGGAGCTGT CGATCTCGTA CACGCTGCCG GTGATGCCCA GCGGGCTCCC CGAGCAATCG AGCAACGACG TGCTGTTCGT GCTCGAAGAC GCGGCCCAGC GCGGCGTCGA ACTCGACGCC GTGAACCTCA TGACGATGAA CTACGGCTCG GCGTTCGAAC TGAACGGCGA GACCGTCGTC GACGCCGCCG AGAGCGTCCA CGGACAGCTG GCCGACATCT ATCCGGAGCG GTCGGCCGCC GAGCGCTGGA ACGCGATCGG CCTGACGCCG ATGATCGGCC AGAACGACGT GGACTCGAAC GTGTTCTACC CCGAGGACGC ACAGACGGTG CTCGATTTCG CCCAGGAGAA GAACCTCCGG TGGCTGTCGT TCTGGGAGCT CGTCCGCGAC AACGGCGAGG GGAGCGCGCT CTACGAGAGC AGCCAGATCG ATCAGGAACC CTACGAGTTC TCGTCGATCT TCGACGAGTT CACGAGCGAC AGCTGA
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Protein sequence | MRRRTYVRSL SALVGLTGVG AASAQQEYPT WDASATYTEG DRVVYEGTIY EAQWWTQGDE PGSTQWGPWT VVDSSDGGSD GGSDGGSDDG SDDGTDGGSG ETDYPAWDAG TTYTGGDRVV YEGTIYEAQW WTRGDEPDAG GPWDEVGPAD GGGGDDGSGD DDSDDSDGGT GTPGAIPENV FAPFVDVALD DQQALTDAVS NAGTKYFTLA FVNSAGGEPA WAGDSNLIVG ESGARLDMQG QIADLRADHG GEVVVSFGGL SGTYLAEAVT SASTLKEKYA TVVDRLDAQF IDFDEEQHIR DNPEVIERRN EALALLQEEY PELSISYTLP VMPSGLPEQS SNDVLFVLED AAQRGVELDA VNLMTMNYGS AFELNGETVV DAAESVHGQL ADIYPERSAA ERWNAIGLTP MIGQNDVDSN VFYPEDAQTV LDFAQEKNLR WLSFWELVRD NGEGSALYES SQIDQEPYEF SSIFDEFTSD S
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