Gene Hmuk_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1476 
Symbol 
ID8410997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1400791 
End bp1401675 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content58% 
IMG OID645019802 
Productputative ISH4 transposase 
Protein accessionYP_003177298 
Protein GI257387525 
COG category[L] Replication, recombination and repair 
COG ID[COG3676] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCAA TAAGCCGGTT CGTGTCGGAA TCGGCTGCAG CGGACCTGCT GGAACAGGTT 
CGCTGGCGTG ATGGCGTCGA GTGCCCCCGC TGCCGTTCTG ACCTGACGGT CAGAAACGGC
AGCTACCGGG TGTATCAACG GTATCTGTGT AAGAATTGCG GTCGCACGTT CAACGACAAG
ACCGACACGA TCTTCGCTCA CTCGAAGCTG AAGCTCAAAG AATGGTACTT CACGATCTAC
GTGTTCTTAC GGTTCAACAC GAGTATTCGG CAAATCGAGG CAGAGCTTGA TTGTTCCTAC
CGGACGGTGA GACGGCACGT CGAGCAGTTC GCCAGAACTC TCGACGCGCC TTCGATTACG
CTGTCTGGAC CGGTCGAAAT CGACGAAGTG TACGTCTCTG CTGGTCTCAA AGGCCGCGAG
CGTGACCAGG AGTCGCGCTC GCGTGGCCTG TCCACGCGTG GACGGGGATC GTACGACGGC
GACAAACCGC CGGTGTTCAC GCTCGTCGAT CGTGGTTCGG ACGAGCGGTA CGTCGTGCCA
GCGAAATCCG CTGACGAATC GACCGTTCGA CTCCTGCTTG CTGACCACGA AGAGGAGTCA
CTGACCGTCT ATACGGACGG ATTTCGGGCC TACGACCCAC TAGAAGACGA CGACTCATTC
ACCCGCAAAT ACGTCGTCCA CAGCGACGGT GAATACGCTG ATGGCGAAGT ACACGTCAAC
GGCTGCGAGA GCCACGCGTC GCTGACGCGA CGGTGGCTCT CGCCCCATCG AGGCGTCTCG
AAAGACAAGC TAACGCCGTA TCTCAGAGCC TTCGAACTCC GCCGTGAACT CTACAGAAAA
CCAGGTGACG AAGCACTCAA ACATGCTCTC AACGCCGCAC TCTGA
 
Protein sequence
MFPISRFVSE SAAADLLEQV RWRDGVECPR CRSDLTVRNG SYRVYQRYLC KNCGRTFNDK 
TDTIFAHSKL KLKEWYFTIY VFLRFNTSIR QIEAELDCSY RTVRRHVEQF ARTLDAPSIT
LSGPVEIDEV YVSAGLKGRE RDQESRSRGL STRGRGSYDG DKPPVFTLVD RGSDERYVVP
AKSADESTVR LLLADHEEES LTVYTDGFRA YDPLEDDDSF TRKYVVHSDG EYADGEVHVN
GCESHASLTR RWLSPHRGVS KDKLTPYLRA FELRRELYRK PGDEALKHAL NAAL