Gene Hmuk_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1462 
Symbol 
ID8410983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1388259 
End bp1389215 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content62% 
IMG OID645019792 
Productprotein of unknown function DUF201 
Protein accessionYP_003177288 
Protein GI257387515 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.127358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.969827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACC TGACCATCCT CCGGACCGCA GTTGGCAGCC TCCCCTCACG CGGTCTCATT 
GATGCGCTCC GCGAGTACGG GTTCAGCGTG GTCGGTGCCG ACGCAAACCC GGCGGCCTAC
GGCCACCTCT ATCTTGACGA GTCGGAAGTC GTGCCGCGGG CTGACGAGCC GACCTTTCTC
GACACCGTGA CTGACCTCGT CGCGGACCAC AACATCGACG CCATTCTCGC CGGGCCCGAG
GCCGAGCTGT TGGCGCTCGC GGGCGAAAAG GCGAAACTCG GCAGACAGGG CGCGACGGTG
CTGTGTCCCG ACGCCAAGAC GGTCGAATTG TGTGCGGACA AGCGACAGAC TCAAGCGGCG
TTTGCTGACG CAGAGATTCC GGTCCCAGAC CTGTACGAGC GCGATGCCGT TGAGTTTCCG
TGTATTGTCA AACCGCGGTT CGGTGGCGGC AGCACGGCCG TCAACGTCGC CCGCTCCGAG
AGCGAGTTAG CGGTGTACGC CGCCGACCTC AACGACCCAA TCTTCCAGAA TTACGTCGAT
GGCCCAGAGT ACACCGTGGA CGTGCTATCG GGAGATGACG GCCGTCCGCT ATCGGTGGTG
CCCCGGCGAC GCCACGGCGT CGAGTCCGGC AAGTCCGTCA CGGGTGAAAC GGTCGCACGC
GAGGATATTA TCGAGCACTG CGAAACCATC TCCCGGGAGT TTGACCTGTT CGGACCTTCT
TGCATTCAGT GTATCGACGG GCCGGACGGA CTGCGGTTTA TCGAGGTTAA CACGCGCTTT
GGCGGCGGGG CAGTCCTCTC AATGCAGGCT GACGACTCGG TGTTGCCAAA TGTTGAGCGG
CTGATCCGCG GCGAGCGCGG TGTCAAGAGT GAAAGCTTTC GAGACGGGCT TGTTATGATA
CGCAACTATA CCGAACTATA CGCCGACCGA ACAGAGGTGT GGGACGATAA TGCGTGA
 
Protein sequence
MTNLTILRTA VGSLPSRGLI DALREYGFSV VGADANPAAY GHLYLDESEV VPRADEPTFL 
DTVTDLVADH NIDAILAGPE AELLALAGEK AKLGRQGATV LCPDAKTVEL CADKRQTQAA
FADAEIPVPD LYERDAVEFP CIVKPRFGGG STAVNVARSE SELAVYAADL NDPIFQNYVD
GPEYTVDVLS GDDGRPLSVV PRRRHGVESG KSVTGETVAR EDIIEHCETI SREFDLFGPS
CIQCIDGPDG LRFIEVNTRF GGGAVLSMQA DDSVLPNVER LIRGERGVKS ESFRDGLVMI
RNYTELYADR TEVWDDNA