Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1454 |
Symbol | |
ID | 8410975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1378911 |
End bp | 1380713 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 645019784 |
Product | ABC transporter related |
Protein accession | YP_003177280 |
Protein GI | 257387507 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATG AACCGGATAA TGTCTCTCGG CGGGACAAAA TAGAAGCCGT GATAGCAGTC GCCCGATTTC GGCCACGCTT CACCGTCGGT GTTTTCGCCT TTGGGATAAC CGCTGCGCTG TTTGAGGGAA TCGGTCTCAG TTTCATACTC CCTATTGTGG AACTCGTGCA GACCCAGGAT TCAGCATCTG AGGCTGACGG ACTCTTAGCG ATATTTGTGA CGTTGTATCG GACCGCCGGG GTCCCATTTA CGCTCGGTAC TGTGATACTA GGGGTGTCGG GAGTGATGGT TGCACGGTAT ACCTCAAACT TTGTCGTTGC TTGGTTGCGG GAAGCGTTGC GAACCTATTA TATCCGAGAT CTACAGGATC GCGCGTTTAG AAACGCACTG AACGCCCGCG TCGATTATTA CGATGAGGAG GGTTCCGACG ATATACTGAA CGCAATTGTA ACCCAAACGT ACTATGCCGG ACGAGTCATT AAGCGCGGTA TCCAGTTCCT TGAACAGACC TTCATGGCGT CTGTATACCT GTTTATCGCC TTTGTAGTCG CCCCGTGGTT GACGCTCTTC GCCGTGTTCG TGCTTGGAGG ATTTACCCTG GTATTTCGGC AAGTGCTGGA GACGGGCTAC GATGTCGGAG AACAGGTCGC CGACGCCAAC AAAGAGCGGC AAGAAGCTGC GCAAGCGGGA ACCCAGGGGA TTAGGGACGT TCGAGTTTTC GGAGTCGCAG ACGAACTATA CCAGGATTTC CAAGACGCGA TTGACAAGTA CACTCAGGCA CGGATACTTC TGCGGCGGAA TGAGGCCGCT ATCGACAAGT TTTACAATCT CATCGTCGCC GTATCTGTCT TTGTACTTAT ATACTTCGCG TTGGAGTTTG CCGATCTGAC ACTGGGCGCG CTTGGGTTGT TCCTGTACGC GATGTTCAGA TTAGGACCGA AGGCGAGCCG AGTGAATACA CTTTTTTACC AAGTGGAGAA TGATTTGCCC CATCTGGTCC GAACGCAGGA GTTTATCCAC GTACTCGAAC AGAATAAAGA AGACAACAGT GGATCGAAAG AGGCGCCCGA GGAGATCAAT GGGGTTGAAT TTGAGGATGT ATGGTTCTCA TACAACGATA GCGAGACCGT TCTCCAGGGG ATGAACTTTC AAGTGGAAAA AGGCCAGTTC GTCGGATTCG TTGGACAGTC AGGAGCAGGC AAGTCGACTC TCGTCTCCTT GCTAGCACGG ATGTACGAGA TTGACCGGGG CACGATCAAG GCTAACGGGG TATCAATCGA TGAGATTGAC ATCGACGACT GGCGTGAATG TCTGTCGGTC GTCCGTCAGA ACCCGTTCAT TTTCAACGAT ACACTCCGAT ACAACTTGAC AATCGGGAAC CGTGACGTGA GTGAGTCAGA ATTAGACCAA GTCTGTTCGA TCGCACGAGT TGACGAGTTT CTCGAAGATC TCCCGGACGG GTACGACACA ATGCTCGGCG ACGAAGGTGT CCGGTTGTCG GGCGGTCAAA AGCAGCGCGT CGCACTTGCA CGGGCGCTGA TCAAGGACGC CGACCTGTTA ATCATGGACG AGGCAACGAG CGACTTGGAC TCGGATCTTG AGAAGCAAGT GCAGCGCGCA ATCGAGGAAA TGGACAGGAA TTATGCGATA ATTACGATCG CACACCGGCT ATCAACCGTG AAGAACGCTG ATCGGATTTA CACTGTTGAG GATGGACGGA TCACCGAACG CGGAACCCAC AACGAATTGG TAGAGACCGA TGGGAAGTAC GCGGAATTGT ACGGAATCCA ATCAGGAAGA TAA
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Protein sequence | MADEPDNVSR RDKIEAVIAV ARFRPRFTVG VFAFGITAAL FEGIGLSFIL PIVELVQTQD SASEADGLLA IFVTLYRTAG VPFTLGTVIL GVSGVMVARY TSNFVVAWLR EALRTYYIRD LQDRAFRNAL NARVDYYDEE GSDDILNAIV TQTYYAGRVI KRGIQFLEQT FMASVYLFIA FVVAPWLTLF AVFVLGGFTL VFRQVLETGY DVGEQVADAN KERQEAAQAG TQGIRDVRVF GVADELYQDF QDAIDKYTQA RILLRRNEAA IDKFYNLIVA VSVFVLIYFA LEFADLTLGA LGLFLYAMFR LGPKASRVNT LFYQVENDLP HLVRTQEFIH VLEQNKEDNS GSKEAPEEIN GVEFEDVWFS YNDSETVLQG MNFQVEKGQF VGFVGQSGAG KSTLVSLLAR MYEIDRGTIK ANGVSIDEID IDDWRECLSV VRQNPFIFND TLRYNLTIGN RDVSESELDQ VCSIARVDEF LEDLPDGYDT MLGDEGVRLS GGQKQRVALA RALIKDADLL IMDEATSDLD SDLEKQVQRA IEEMDRNYAI ITIAHRLSTV KNADRIYTVE DGRITERGTH NELVETDGKY AELYGIQSGR
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