Gene Hmuk_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1454 
Symbol 
ID8410975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1378911 
End bp1380713 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content52% 
IMG OID645019784 
ProductABC transporter related 
Protein accessionYP_003177280 
Protein GI257387507 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATG AACCGGATAA TGTCTCTCGG CGGGACAAAA TAGAAGCCGT GATAGCAGTC 
GCCCGATTTC GGCCACGCTT CACCGTCGGT GTTTTCGCCT TTGGGATAAC CGCTGCGCTG
TTTGAGGGAA TCGGTCTCAG TTTCATACTC CCTATTGTGG AACTCGTGCA GACCCAGGAT
TCAGCATCTG AGGCTGACGG ACTCTTAGCG ATATTTGTGA CGTTGTATCG GACCGCCGGG
GTCCCATTTA CGCTCGGTAC TGTGATACTA GGGGTGTCGG GAGTGATGGT TGCACGGTAT
ACCTCAAACT TTGTCGTTGC TTGGTTGCGG GAAGCGTTGC GAACCTATTA TATCCGAGAT
CTACAGGATC GCGCGTTTAG AAACGCACTG AACGCCCGCG TCGATTATTA CGATGAGGAG
GGTTCCGACG ATATACTGAA CGCAATTGTA ACCCAAACGT ACTATGCCGG ACGAGTCATT
AAGCGCGGTA TCCAGTTCCT TGAACAGACC TTCATGGCGT CTGTATACCT GTTTATCGCC
TTTGTAGTCG CCCCGTGGTT GACGCTCTTC GCCGTGTTCG TGCTTGGAGG ATTTACCCTG
GTATTTCGGC AAGTGCTGGA GACGGGCTAC GATGTCGGAG AACAGGTCGC CGACGCCAAC
AAAGAGCGGC AAGAAGCTGC GCAAGCGGGA ACCCAGGGGA TTAGGGACGT TCGAGTTTTC
GGAGTCGCAG ACGAACTATA CCAGGATTTC CAAGACGCGA TTGACAAGTA CACTCAGGCA
CGGATACTTC TGCGGCGGAA TGAGGCCGCT ATCGACAAGT TTTACAATCT CATCGTCGCC
GTATCTGTCT TTGTACTTAT ATACTTCGCG TTGGAGTTTG CCGATCTGAC ACTGGGCGCG
CTTGGGTTGT TCCTGTACGC GATGTTCAGA TTAGGACCGA AGGCGAGCCG AGTGAATACA
CTTTTTTACC AAGTGGAGAA TGATTTGCCC CATCTGGTCC GAACGCAGGA GTTTATCCAC
GTACTCGAAC AGAATAAAGA AGACAACAGT GGATCGAAAG AGGCGCCCGA GGAGATCAAT
GGGGTTGAAT TTGAGGATGT ATGGTTCTCA TACAACGATA GCGAGACCGT TCTCCAGGGG
ATGAACTTTC AAGTGGAAAA AGGCCAGTTC GTCGGATTCG TTGGACAGTC AGGAGCAGGC
AAGTCGACTC TCGTCTCCTT GCTAGCACGG ATGTACGAGA TTGACCGGGG CACGATCAAG
GCTAACGGGG TATCAATCGA TGAGATTGAC ATCGACGACT GGCGTGAATG TCTGTCGGTC
GTCCGTCAGA ACCCGTTCAT TTTCAACGAT ACACTCCGAT ACAACTTGAC AATCGGGAAC
CGTGACGTGA GTGAGTCAGA ATTAGACCAA GTCTGTTCGA TCGCACGAGT TGACGAGTTT
CTCGAAGATC TCCCGGACGG GTACGACACA ATGCTCGGCG ACGAAGGTGT CCGGTTGTCG
GGCGGTCAAA AGCAGCGCGT CGCACTTGCA CGGGCGCTGA TCAAGGACGC CGACCTGTTA
ATCATGGACG AGGCAACGAG CGACTTGGAC TCGGATCTTG AGAAGCAAGT GCAGCGCGCA
ATCGAGGAAA TGGACAGGAA TTATGCGATA ATTACGATCG CACACCGGCT ATCAACCGTG
AAGAACGCTG ATCGGATTTA CACTGTTGAG GATGGACGGA TCACCGAACG CGGAACCCAC
AACGAATTGG TAGAGACCGA TGGGAAGTAC GCGGAATTGT ACGGAATCCA ATCAGGAAGA
TAA
 
Protein sequence
MADEPDNVSR RDKIEAVIAV ARFRPRFTVG VFAFGITAAL FEGIGLSFIL PIVELVQTQD 
SASEADGLLA IFVTLYRTAG VPFTLGTVIL GVSGVMVARY TSNFVVAWLR EALRTYYIRD
LQDRAFRNAL NARVDYYDEE GSDDILNAIV TQTYYAGRVI KRGIQFLEQT FMASVYLFIA
FVVAPWLTLF AVFVLGGFTL VFRQVLETGY DVGEQVADAN KERQEAAQAG TQGIRDVRVF
GVADELYQDF QDAIDKYTQA RILLRRNEAA IDKFYNLIVA VSVFVLIYFA LEFADLTLGA
LGLFLYAMFR LGPKASRVNT LFYQVENDLP HLVRTQEFIH VLEQNKEDNS GSKEAPEEIN
GVEFEDVWFS YNDSETVLQG MNFQVEKGQF VGFVGQSGAG KSTLVSLLAR MYEIDRGTIK
ANGVSIDEID IDDWRECLSV VRQNPFIFND TLRYNLTIGN RDVSESELDQ VCSIARVDEF
LEDLPDGYDT MLGDEGVRLS GGQKQRVALA RALIKDADLL IMDEATSDLD SDLEKQVQRA
IEEMDRNYAI ITIAHRLSTV KNADRIYTVE DGRITERGTH NELVETDGKY AELYGIQSGR