Gene Hmuk_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1440 
Symbol 
ID8410960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1364000 
End bp1365796 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content67% 
IMG OID645019771 
ProductSuccinate dehydrogenase 
Protein accessionYP_003177268 
Protein GI257387495 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACC CAGACACTGC CGACAGCGAG GAAACGTCTG TGCCCGGATA CGAGCGAGTC 
GACGTCTCGG TACTCGTCGT TGGAGCGGGC GCTGCCGGCG CTCGTACGGC GATCGAACTC
GCCGAGCGCG GCGTCGACGA CGTGCTGGTG CTGGGCAAAC GGAGCCACGG CGACGCGCAC
ACGACGTGGG CACGCGGCGG TATCAACGGC GCGCTGGGGA CCCACGATCC GGATGACTCG
TGGGCGATCC ACGCCGCCGA CACCCTCAAC GAGGGCCACT TCGTCAACGA CCCACAGAAG
GTCGAGACGG TGACCAGACA GATGCCCGAC CGCCTCAGGG AACTCGACGA CTGGGGAATG
GACTTCTCCC GGACGGAAGG CGGCGAGATC GACCAGCGAT TCTTCGGTGC CCAGTCGTTC
CGTCGAACGG CGTTCGCGGG CGATCACACC GGCGAGTCGA TGCTGGAGAC GCTCGTCGAC
CGGGCACAGG AGCTGTCGGT GCCGTACCGC GAGAACGTGA TGATCACCAA GCTGCTGTCG
GACGGTGACC AGTGCTACGG CGCGGTTGGG TTCGACATGG ACTCCGGCGA GTTCGTGCTC
GTCAACGCGG GGACGGTCGT GCTAGCGGCC GGTGGCTACG CCGCGGCCTA CAACCGCCAT
ACGTCTCGCG ACGACGAGAA CAACGGCGAC GGTCCGGCAC TGGCCTACCA CGCGGGTGCC
GAACTCGTGG ACATGGAGTT CGTTCAGTTC CACCCGACGG GAATGGCGGT CGACGAAGAC
GATCCCGAGT GGGAGCCCTG GAGTGGGCGG CTCGTCACCG AGGCAGTTCG CGGCGAGGGA
GGACACCTCT ACAACACCGA CGGCGAGCGG TTCATGGAGC GGTACTCGCC GGATCAGATG
GAGCTGGACG CCCGCGACGT CGTCGCCCGA GCGATCGCAC AGGAGATCGC GGAGGGGCGT
GGCACCGACA ACGGCGGCGT CTTCCTCGAC CTCTCTCACA GAGACCGTAC ATTCATTCGA
GAGCGTCTCC CGCGGATGTA CGAGCGGTTC CAGGAACTGG GCGTCGACAT GGCGACCGAA
CCCGTCGAAG TCGCGCCGAC AGCCCACTAC GGCATGGGTG GCGTCGCCGT CGACGAGCAC
GGGGAGACGG CCGTCGACGG ACTGTTCGCG ATCGGCGAGA CGATGGCCGG CGTCCACGGT
GCCAACCGAC TCGGTGGCAA CTCGCTGGCA GAGACCGTCG CGTTCGGCGT CGTTGCGGGC
GAACGGATCG CCGAGCGCGT CGACGGAGCG GGGTACCTGC CCGAGGCGGT CGTCTCTGAT
ATCGCCGACC CGCAGTTCCG TGGTCTGGCG ACACTGGCCG GTCGAGACGG CGCTCACGAC
GTGACGGACG TGTTCACCGA ACTACAGGAC CTGCTGTGGG AACACGCGGG TCTCCTGCGA
ACGGACACGT CGTTGCGGGC GGGCCTCGAC GCACTCGACG AGGTCCGTCA GAAGGCCGCC
GACATGGACG TGGGTTCGGC GACGAGTTCG TCCTTCGAGT TCGCGATCGA CATCGGGTTC
ATGCTGACCG CCGCCGAGGC GGTCCTGCGT GGCGCACTCG AACGGACCGA GTCCCGGGGC
GCACACTACC GGACCGACGA GACAGAGACG GATCCGGACT GGCAGTGCAA CATCTACTTC
GAACGCTCCG ATGTCGGTGG CATGCGGACC GAGACGCGAC CGGTCGGCAC GCCGAGCGAC
GCCGTCCAGG CGGCTCTCGA CGAAGGACAC GAACTGGATT ACCACCAGCT CGAATGA
 
Protein sequence
MSNPDTADSE ETSVPGYERV DVSVLVVGAG AAGARTAIEL AERGVDDVLV LGKRSHGDAH 
TTWARGGING ALGTHDPDDS WAIHAADTLN EGHFVNDPQK VETVTRQMPD RLRELDDWGM
DFSRTEGGEI DQRFFGAQSF RRTAFAGDHT GESMLETLVD RAQELSVPYR ENVMITKLLS
DGDQCYGAVG FDMDSGEFVL VNAGTVVLAA GGYAAAYNRH TSRDDENNGD GPALAYHAGA
ELVDMEFVQF HPTGMAVDED DPEWEPWSGR LVTEAVRGEG GHLYNTDGER FMERYSPDQM
ELDARDVVAR AIAQEIAEGR GTDNGGVFLD LSHRDRTFIR ERLPRMYERF QELGVDMATE
PVEVAPTAHY GMGGVAVDEH GETAVDGLFA IGETMAGVHG ANRLGGNSLA ETVAFGVVAG
ERIAERVDGA GYLPEAVVSD IADPQFRGLA TLAGRDGAHD VTDVFTELQD LLWEHAGLLR
TDTSLRAGLD ALDEVRQKAA DMDVGSATSS SFEFAIDIGF MLTAAEAVLR GALERTESRG
AHYRTDETET DPDWQCNIYF ERSDVGGMRT ETRPVGTPSD AVQAALDEGH ELDYHQLE