Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1433 |
Symbol | |
ID | 8410953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1356281 |
End bp | 1358053 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645019764 |
Product | PUA domain containing protein |
Protein accession | YP_003177261 |
Protein GI | 257387488 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
TIGRFAM ID | [TIGR00449] tRNA-guanine transglycosylases, various specificities [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACT ACTTCGAGGT TCACGAGCGC GACGGCGCGG CGCGGCTGGC CGAGTTGCGG CTGGCCGATC CGGTCACGAC GCCCGCGGTC GTGGACGACC ACCTCGCGGA CGCCGGAAGC CTCTGGCCGA CGGAGCGAGA CGTGCCAGCG GGCGACGAGA GCGTCCTCAC CGTCCTCCCG CACCGCGGCC TCCCCGGCGG CACGCCCGAG GAGGTCGCCG AGGCGTTCGC CGTCGACTAT CCGGACGTGG ACTATCCGAG CGCCGCCGTC GTCTCGACGG CGACGGCCGA GGACCACGGC GCGGACGCGT ACGTCCTCTC GGAGGCCGCC GGGCTCGTCG GCCACGCCGA AGCGTTCGTC GAGGCCGTTA TCGAGACACG CGAAGCGATG CCGGACGACA CCGCTCTGAT GCTGTCGGGC GTCGCGACGC CGCGCAACGT CGCCACGCTG GTCTACGCTG GCGTCGACCT CGTCGATCGG GACCGGGCCG TCGTCCGGGG GACACAGGGG CGATACCTGA CGACCGACGA CGCCTACTTC CTGGAAGACC TCGACGAACT GCCCTGCTCG TGTCCGGCCT GCCGCAAGCC CCGCGAGGAG TTCGACCGAC AGGACTGTGT CGACCACAAC GTCAACGCGC TGGAAGCGGA GCTGGCCCGG GTCCGCCGAC GGATTCGAGA CGGCCGGCTG CGTGACTACG TCGAGGGCCA GGCCCGCCAG GACCAGTGGC TGACGGCGAC GGTGCGGCGG CTCGACCAGC AGTACGCCTA CCTCGAACGA CACACGCCGA TCTACCGACG CGAGGAGATC ACCGCCGCGA CCGAAGACAC GATGCGCCGG GTCGAGATCC AGCGGTTCGC ACAGCGGGTC ACCGAGCGGT ACCGGCCCCG CTTCGACGAG CAGCCCCTCG TCATCGTCCC CTGCTCGGCG CGCAAGCCCT ACAGCGACTC ACAGAGCCAC GAGCAGTACC ACCGGGCGAT CCAGTTCCGT GGCCACATGG CGTCGATGAC GTCGCCGATC GGCGTCGTCC CACAGGAACT GGAGCTCACC TATCCGGCCC AGCACTACGA CTCCGTCGTG ACCGGGCGGT GGAGCGCCAA CGAGATCGAG TTCGTGGCCG ACGTGCTCGA AGGCTACCTC GACGGCACCG ACTACCCCGA AGTGATCGTC CACGTCCCCG GCGAGGGGTA CCGCGAGATC TGCGAGCGCG TCGAGGAGCG CCTCGACCAG TCTTTCACCT ACACCGTCGA AGACCACCCG ACGACGGCGG ACTCGCTGGC GAACCTCGCC GGGGCGCTGG AGGGGTACCC GAAGTACCGC AAGCGCGAGC GCCAGCACAA CACGCTTCGG GCAGTGGCGG ACTACCAGTT CGGGGCCGGT GCGGGCGACG AGATCTTCGG CGACACGCTC ACCGCGGAGG GGACGTACCC CCAGCTACGG GCCCACGGCG AACGGACCGA CGGCGGCCAG GGCGAACAGC TGGCGGCGCT GACCCAGCAG TACGGCGTCC TCGGGCTCAC GATCGCGGGA GCCCGACGGT GGGTCGACTC GGACGTGTCG GTAAAGCGCG TCGCGATCGA CGACTTCGTG CCACACGGCT CCGTGCTCGC GCCGGGCGTC GTGGACGCGG CCGACGAGAT CCGCGTCGGC GACGAGGTCG TGATCGAGGG GCCGTCGGCC TTCGGCGTCG GTCGCGCGAC GATGCCCGGC CCGGCGATGG ACGAGGCCAC CCGCGGGATC GCCTGCCAGG TGCGCCACGT CGAAGAACAG TAG
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Protein sequence | MTDYFEVHER DGAARLAELR LADPVTTPAV VDDHLADAGS LWPTERDVPA GDESVLTVLP HRGLPGGTPE EVAEAFAVDY PDVDYPSAAV VSTATAEDHG ADAYVLSEAA GLVGHAEAFV EAVIETREAM PDDTALMLSG VATPRNVATL VYAGVDLVDR DRAVVRGTQG RYLTTDDAYF LEDLDELPCS CPACRKPREE FDRQDCVDHN VNALEAELAR VRRRIRDGRL RDYVEGQARQ DQWLTATVRR LDQQYAYLER HTPIYRREEI TAATEDTMRR VEIQRFAQRV TERYRPRFDE QPLVIVPCSA RKPYSDSQSH EQYHRAIQFR GHMASMTSPI GVVPQELELT YPAQHYDSVV TGRWSANEIE FVADVLEGYL DGTDYPEVIV HVPGEGYREI CERVEERLDQ SFTYTVEDHP TTADSLANLA GALEGYPKYR KRERQHNTLR AVADYQFGAG AGDEIFGDTL TAEGTYPQLR AHGERTDGGQ GEQLAALTQQ YGVLGLTIAG ARRWVDSDVS VKRVAIDDFV PHGSVLAPGV VDAADEIRVG DEVVIEGPSA FGVGRATMPG PAMDEATRGI ACQVRHVEEQ
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