| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1416 |
|---|
| Symbol | |
|---|
| ID | 8410936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1338906 |
|---|
| End bp | 1339568 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645019747 |
|---|
| Product | Bacterio-opsin activator HTH domain protein |
|---|
| Protein accession | YP_003177244 |
|---|
| Protein GI | 257387471 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3413] Predicted DNA binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.928147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTACG TCACCGTTCG CGTCGAGCCG CGTGAGGGCA CCGCCTTCCA CCCGCTCGGG
CAGGCGCTGT CCGACGCCGA GGACATCACC CGCGAGGCGA TCCACCGCGT CGAGTTGCTC
GACGACGGCA GCGGCGTGAT GCTCGCGGAG GCGCGGGGCA ACCGCGACCA CTACGAGGCG
ATCCTCGACG ACAGCGACTA CGTCTGTCAG TACGCCGTCA CCGGGACGGA GGGGCGCTGG
TACGCCTACT GTCAGTTCGA CCCCAACGAG GCCAACTACC GGATGCTCCA GCACCGCCAG
GAGTCGACCG TGATGATGGA GATGCCCATC GAGGTCCACC CCACCGGCGC GATGGAGATC
ACCTTCGTCG GCGACGAGGG AGCCTTCAGC GAGGCGGTGC CGTCGGAAGG GGAGGCGTTC
GAGATCGAAC TGCTGGAGAC CGGCCAGCGC CCGCCTCGCG GCGAGGACCT CTTTGCCTGT
CTGACCGACC GCCAGCAGAC GATCCTCGAA ACGGCGATCG AGCTGGGGTA CTACGAGAAT
CCTCGAGAGG CCACCCAGGC GGAGATCGCC GACGCCGTCG ACGCGACCGC CGGAACCGTC
GGCGAACACC TCCGGAAGAT CGAGCACCGG GTGTTCTCGC AGTTCGTCGA TCCGGACTCG
TGA
|
|---|
| Protein sequence | MRYVTVRVEP REGTAFHPLG QALSDAEDIT REAIHRVELL DDGSGVMLAE ARGNRDHYEA
ILDDSDYVCQ YAVTGTEGRW YAYCQFDPNE ANYRMLQHRQ ESTVMMEMPI EVHPTGAMEI
TFVGDEGAFS EAVPSEGEAF EIELLETGQR PPRGEDLFAC LTDRQQTILE TAIELGYYEN
PREATQAEIA DAVDATAGTV GEHLRKIEHR VFSQFVDPDS
|
|---|
| |