| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1407 |
|---|
| Symbol | |
|---|
| ID | 8410927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1331783 |
|---|
| End bp | 1332496 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645019738 |
|---|
| Product | transcriptional regulator, ModE family |
|---|
| Protein accession | YP_003177235 |
|---|
| Protein GI | 257387462 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2005] N-terminal domain of molybdenum-binding protein |
|---|
| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain
[TIGR00638] molybdenum-pterin binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.32404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.631353 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGG ACGTGGCCGT CTCGCTGACT GCCGATGGGG TGACCGTCGA CGCGTCGGAC
GCGGCGCTGT TGCGGGCCGT CGACAGCGAG GGATCGCTGA ACGCGGCCGC CACTGCGCTC
GGCCGTTCGT ACTCTCGGGC CCACAAGCGC CTGACAGTCC TGGAAGAGAC GCTGGGCTCG
CTCGTCGAGC GCGAACGCGG GGGAGAGGGC GGCGGTGGGA GCGTCCTCAC CGACCGGGGC
CGCGAACTGC TGACGCAGTT CGCCCGCGTC CACACCGTGG TTTCGGGAAC GGCCGCCGCG
GACGTGATCG CGCTCTCTGG CACCGTTCGC GAGCGATCGG GACGGCTGGT GACCGCCGAG
AGTCCGGCGG GCGAGTTGCA CGCGATCGTC GTCGGCGGGG ACCGGGACCC GTCGGTCGAC
ACCGGCGACG ACGTGACGGT GACGCTGACC GCCGACGCCG TGACACTCCA GGAGCCAGAC
GCCACTCTCT CGGCCACCCG GACGAGTGCC CGCAACCGAC TGCGCGGAAC GGTGACGGCC
GTCGACGAGC GCGACGGCGT CGCGACGATC ACCGTCGACG TCGGAGCGGC GACGCCCATC
CCGGTACTGG TCACGGCGGC GAGTCGAGCA CGCCTCGATC TGGAACCGGG CGATCCCGTC
GTGGCGACGT TCAAAGCGAC GGCCGCCAGA GTGACGCGGC TCTCCGAGGA GTGA
|
|---|
| Protein sequence | MDTDVAVSLT ADGVTVDASD AALLRAVDSE GSLNAAATAL GRSYSRAHKR LTVLEETLGS
LVERERGGEG GGGSVLTDRG RELLTQFARV HTVVSGTAAA DVIALSGTVR ERSGRLVTAE
SPAGELHAIV VGGDRDPSVD TGDDVTVTLT ADAVTLQEPD ATLSATRTSA RNRLRGTVTA
VDERDGVATI TVDVGAATPI PVLVTAASRA RLDLEPGDPV VATFKATAAR VTRLSEE
|
|---|
| |