Gene Hmuk_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1405 
Symbol 
ID8410925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1329956 
End bp1330762 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content71% 
IMG OID645019736 
ProductNifC-like ABC-type porter 
Protein accessionYP_003177233 
Protein GI257387460 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR01581] NifC-like ABC-type porter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.158337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.495211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGCCT TCGACCCGCG ACGACTTCGG ACGCCGACAC GGTTCGTACC GGCGCTACTG 
GGCGGTGTCC TGCTCGTCCA CTTCGTCGTG CCGTTCGCGG CCTTCCTCTC ACAGACTGGC
ACGTCGAACG TCGTCGCCGG GCTGTCGGCC CCGCCAGCGC GGAGCGCGAT CCGGAACTCG
CTGCTGACGG CCCCGGTCGC GACCCTGTTT TCGACGCTGT TCGGCGTCCC GCTGGCGTAC
GCGCTCGCCC GAACGTCCGT CCGCGGGAAG CGCCTGATAG AGGGGGTCGT CGTCCTGCCA
CTGGTCGTGC CGCCGGTGGT CGGCGGCGCG ATGCTCCTGA CGGCAGTGGG GCGCTTCACG
CCGCTTGGCC GCGCGGCGCT GGCAGCGGGC CTCCCGCTGA CCGACAGCCT CGCAGGCGTG
ATCCTCGCCC AGACGTTCGT CGCCGGCCCC TTCGTCGTCG TCACGGCGCG GGCCGGCTTC
GGTGCCGTCG ACGAGCGACT GGAACAGGCG TCGCGCTCGC TGGGGTACGG ACCGCTGGCG
ACGTTCTGGA ACGTCTCGCT CCCGCTGGCA CGGGGCGCGA TCGTCGCGGG CGTCGTCCTC
ACGTTCGCGC GGGCGGTCGG AGAGTTCGGT GCCACGATGA TGGTCGCGTA CAACCCCCGG
ACGATCCCGA CGCGGATCTG GGTCGAGTTC ATCGCCGGGG GGATCGACGC GATCGTGCCG
CTCGCGCTGG CGTTGCTCGC CATCACGGTC GTCGTCGTCA CCACGGTCCA GCGGCTCGGA
TACGTTCCGA CGGTGGTCGA CGGATGA
 
Protein sequence
MRAFDPRRLR TPTRFVPALL GGVLLVHFVV PFAAFLSQTG TSNVVAGLSA PPARSAIRNS 
LLTAPVATLF STLFGVPLAY ALARTSVRGK RLIEGVVVLP LVVPPVVGGA MLLTAVGRFT
PLGRAALAAG LPLTDSLAGV ILAQTFVAGP FVVVTARAGF GAVDERLEQA SRSLGYGPLA
TFWNVSLPLA RGAIVAGVVL TFARAVGEFG ATMMVAYNPR TIPTRIWVEF IAGGIDAIVP
LALALLAITV VVVTTVQRLG YVPTVVDG