Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1405 |
Symbol | |
ID | 8410925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1329956 |
End bp | 1330762 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645019736 |
Product | NifC-like ABC-type porter |
Protein accession | YP_003177233 |
Protein GI | 257387460 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0555] ABC-type sulfate transport system, permease component |
TIGRFAM ID | [TIGR01581] NifC-like ABC-type porter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.158337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.495211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGGCCT TCGACCCGCG ACGACTTCGG ACGCCGACAC GGTTCGTACC GGCGCTACTG GGCGGTGTCC TGCTCGTCCA CTTCGTCGTG CCGTTCGCGG CCTTCCTCTC ACAGACTGGC ACGTCGAACG TCGTCGCCGG GCTGTCGGCC CCGCCAGCGC GGAGCGCGAT CCGGAACTCG CTGCTGACGG CCCCGGTCGC GACCCTGTTT TCGACGCTGT TCGGCGTCCC GCTGGCGTAC GCGCTCGCCC GAACGTCCGT CCGCGGGAAG CGCCTGATAG AGGGGGTCGT CGTCCTGCCA CTGGTCGTGC CGCCGGTGGT CGGCGGCGCG ATGCTCCTGA CGGCAGTGGG GCGCTTCACG CCGCTTGGCC GCGCGGCGCT GGCAGCGGGC CTCCCGCTGA CCGACAGCCT CGCAGGCGTG ATCCTCGCCC AGACGTTCGT CGCCGGCCCC TTCGTCGTCG TCACGGCGCG GGCCGGCTTC GGTGCCGTCG ACGAGCGACT GGAACAGGCG TCGCGCTCGC TGGGGTACGG ACCGCTGGCG ACGTTCTGGA ACGTCTCGCT CCCGCTGGCA CGGGGCGCGA TCGTCGCGGG CGTCGTCCTC ACGTTCGCGC GGGCGGTCGG AGAGTTCGGT GCCACGATGA TGGTCGCGTA CAACCCCCGG ACGATCCCGA CGCGGATCTG GGTCGAGTTC ATCGCCGGGG GGATCGACGC GATCGTGCCG CTCGCGCTGG CGTTGCTCGC CATCACGGTC GTCGTCGTCA CCACGGTCCA GCGGCTCGGA TACGTTCCGA CGGTGGTCGA CGGATGA
|
Protein sequence | MRAFDPRRLR TPTRFVPALL GGVLLVHFVV PFAAFLSQTG TSNVVAGLSA PPARSAIRNS LLTAPVATLF STLFGVPLAY ALARTSVRGK RLIEGVVVLP LVVPPVVGGA MLLTAVGRFT PLGRAALAAG LPLTDSLAGV ILAQTFVAGP FVVVTARAGF GAVDERLEQA SRSLGYGPLA TFWNVSLPLA RGAIVAGVVL TFARAVGEFG ATMMVAYNPR TIPTRIWVEF IAGGIDAIVP LALALLAITV VVVTTVQRLG YVPTVVDG
|
| |