Gene Hmuk_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1399 
Symbol 
ID8410919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1325775 
End bp1326467 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID645019730 
Productbeta-lactamase domain protein 
Protein accessionYP_003177227 
Protein GI257387454 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.290066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACTC GGCTCGCTGA CGGCGTCTGG TGGATCGACC TCCGTGGGGT CAACGCCTAC 
CTGATCGACG AAGCGGTCGC TGGCGACGGC GCTGGCTCCG GCGTGACGCT GGTCGACGCG
GGACTGCCGT GGCACGGCAC GCAGCTGAGC GCGGCGATTG CCGCGGCCGG CTACGAACTG
CGCGACATCG AGCGCGTGCT GGTGACCCAC TACGACATCG ACCACGTCGG CGGACTGGCG
GGACTCGACG GCCTCGACGC GCCGATCTAC GTCGGCGAGG CCGATGCCGA ACTGGTCGCG
GGCCGACGGC GGCCGCCCTG GCACAACCAC AAAGGACTGT TCCAGCGGGC GATGGCCGGC
TTCGTCTCCC CGCCCACGAA CCGGATCGAA CCCGTCACCG ACGGCGACAC CGTCGGGGAG
TTCACCGTCT ACGCGACGCC GGGCCACACG CCCGGCCACG TGGCCTACGT GAGCGAGCGC
GCCTCGGTCG GACTGCTCGG CGATCTGGTA CGAGAGTCGC GTGGCACGCT CCGGCCGTCG
CCGTGGCTCC TCAGCTACGC CACCGGCGAG GTCGAGCGCA GCATCGCGGA GCTGAACGGA
CGAGCGCCCG ACTTCGCGGT GCTGGGTATG GGGCACGGTC GCCCGTTCGA GCGCGACGGA
CGCGAGCGCC TGACGGAACT GGCCCGCGAG TGA
 
Protein sequence
MVTRLADGVW WIDLRGVNAY LIDEAVAGDG AGSGVTLVDA GLPWHGTQLS AAIAAAGYEL 
RDIERVLVTH YDIDHVGGLA GLDGLDAPIY VGEADAELVA GRRRPPWHNH KGLFQRAMAG
FVSPPTNRIE PVTDGDTVGE FTVYATPGHT PGHVAYVSER ASVGLLGDLV RESRGTLRPS
PWLLSYATGE VERSIAELNG RAPDFAVLGM GHGRPFERDG RERLTELARE