Gene Hmuk_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1394 
Symbol 
ID8410914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1322489 
End bp1323406 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID645019725 
ProductGMP synthase subunit B 
Protein accessionYP_003177222 
Protein GI257387449 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.216363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACG TCGAGTCGTT CATCGACGAG AAGGTCGACG AGATCGCAGA CGCCGTCGGG 
GACGAGAACG CCGTCATCGC GCTGTCCGGT GGCGTCGACT CCTCGACGGC CGCCGCGCTG
GCCTACGAGG CTATCGGCGA CCAGCTTACC CCGGTCTACG TCGACACGGG GCTGATGCGC
AAGGGCGAGA CCGACGAGAT CCGCGAGACC TTCGACTACA TGGACTCGCT GCGGATCGTC
GACGCTACGG ACCGCTTCCT CGACGCCCTC GAAGGCGAGA CCGATCCCGA GGAGAAGCGC
CACATCATCG GCGAGCAGTT CATCAGGGAG TTCGAGACCG TCGCCAAAGA CGTCGATGCG
GACTACCTCG TTCAGGGGAC GATCTACCCC GACCGGATCG AGAGCGAGGG GACGATCAAG
TCCCACCACA ACGTCGGCGG CCTCCCCGAG GTCGTCGACT TCGAGGGGAT CGTCGAGCCG
ATGCGGGACC TCTACAAGGA CGAGGTTCGC GAGGTCGCAC GCGCACTCGA CCTGGAGGAG
ATCATCTCCG AGCGGATGCC CTTCCCCGGC CCCGGCCTCG CAGTGCGGAT CATCGGCGAG
GTCACCGAGG AGAAACTGGA AGTCGCTCGC GAGGCCAACC ACGTCGTCGA GGACGAACTC
GAAGAGTACG AGCCCTGGCA GGCACTCGCT GCCGTCATCG GCAAGGCCAC CGGTGTCAAG
GGCGACAACC GCGTCCACGG CTGGGTCGTC GCGGTCCGCT CGGTCGAATC GCGCGACGGC
ATGACCGCCC GCGCACAGGA GATCGACTGG GAGACCCTCC AGCGCATCCA GTCCCGGATC
ACGGGCTCCC ACGAGAACGT CGCTCGCGTC GTCTACGACG TGACTCACAA ACCGCCCGCG
ACCATCGAGT ACGAATGA
 
Protein sequence
MVDVESFIDE KVDEIADAVG DENAVIALSG GVDSSTAAAL AYEAIGDQLT PVYVDTGLMR 
KGETDEIRET FDYMDSLRIV DATDRFLDAL EGETDPEEKR HIIGEQFIRE FETVAKDVDA
DYLVQGTIYP DRIESEGTIK SHHNVGGLPE VVDFEGIVEP MRDLYKDEVR EVARALDLEE
IISERMPFPG PGLAVRIIGE VTEEKLEVAR EANHVVEDEL EEYEPWQALA AVIGKATGVK
GDNRVHGWVV AVRSVESRDG MTARAQEIDW ETLQRIQSRI TGSHENVARV VYDVTHKPPA
TIEYE