Gene Hmuk_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1389 
SymbolthrS 
ID8410909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1315798 
End bp1317720 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content64% 
IMG OID645019720 
Productthreonyl-tRNA synthetase 
Protein accessionYP_003177217 
Protein GI257387444 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.210838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.265158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG TCACGGTCAC GCTACCGGAT GGCTCCCCTC TCGAACTTGA GGTCGGGGCC 
ACCGTCGAGG ACGCCGCCTA CGAGATCGGC CCGGGTCTCG GCTCGGACAC GGTTGCCGGC
GTCGTCGACG GTGAGCTCGT CGACAAACAC ACCCCGCTGC CCGACGATGC AGACCTCGAG
ATCGTCACAG ACGGGGCCGA CGAGTACGTC GACGTGCTTC GCCACTCGGC GGCACACGTC
TTCGCACAGG CGCTCCAGCG ACTGTACCCG GAGGCAGAGC TGACACTGGG ACCGTGGACC
GACGACGGCT TCTACTACGA CGTGACCGGC GTCGACCTCG ACGAGGACGA CCTCGAAGAC
ATCGAGGAAG AGGCCCACGA GATCATCGCT GAGGACCTCG ACATCGAACG CGTCATGCTC
GACCGCGAGG CGGCGCTCGA TCGCTACGAG GACAACGAGT ACAAGCAGGA GATCCTGGCG
ACGGAGGCGG CCGGCGAGGA CCCCGTCTCG TTCTACGAAC AGGGCGAGTT TTACGACCTC
TGTCAGGGCC CCCACGTCGA GTCGACCGGC GAGATCGGCG GCTTCGCGCT GCTGGAGATG
TCGGCCTCCT ACTGGCGCGG CGAGGAAGAC AACGACACCC TCACGCGGGT GTACGGCACC
GCGTTCCCGA CCGAGGAGGA GCTCGACGAG TACCTGGAGC GCCGCCAGAA GGCCAAGGAA
CGCGACCACC GCAAGATCGG CCAGGAGATG GACCTGTTCT CCATCGACGA GACGACGGGT
CCGGGACTCC CGCTGTACGA ACCCAACGGG AAGACGGTCC TCAACGAACT CTCCGAGTAC
GTCGCCGATC TGAACCGCGA GGCCGGCTAC GACGAGGTCG AGACGCCCCA CGTCTTCCGC
ACCGAGCTGT GGAAGAAGTC GGGCCACTAC GACAACTACG TCGACGACAT GTTCCTGCTG
GACGTCAACG ACGAGGAGTA CGGCCTCAAG CCGATGAACT GTCCGGGCCA CGCGACGATC
TTCGACCAGA AGTCCTGGTC CTATCGCGAC CTGCCGATCC GCTACTTCGA GGACGGCAAG
GTCTACCGCA AGGAACAGCG CGGCGAGCTA TCTGGGCTCT CGCGGACGTG GTCGTTCACG
ATCGACGACG GCCACCTGTT CGTCCGGCCC GACCAGATCG AGGCGGAGGT CCTGTCGATC
ATGGACATCA TCCTCGACAT CCTGGACACG TTCTCGCTCG ACTACACCGT CCAGTTCGCC
ACCCGCCCCG AGAAGTCCAC CGGAAGCGAC GAGATCTGGG AGAAGGCAGA GTCCCAGCTC
GAAGCGGTGT TAGAGCAAGA GGGCATCGAC TACGTCGTCG AAGAGGGCGA CGGCGCGTTC
TACGGCCCGA AGATCGACTT CGCCTTCGAG GACGCGCTTG GTCGCCACTG GGACGGCCCG
ACCGTCCAGC TGGACTTCAA CATGCCCGAC CGGTTCGATC TGACCTACAC GGGCGAGGAC
AACGAAGACC ACCGCCCGGT GATGATCCAC CGCGCGCTCT ATGGCAGCTA CGAGCGGTTC
TTCATGGTGC TCATCGAGCA CTACAACGGG AAGTTCCCGC CGTGGCTCGC GCCCGAGCAG
GTCCGCATCC TCCCGGTCAG CGACGACAAC ATCGACTACT GCGAGGAGAT CGCGGCGGAG
CTCGACGACT TCCGCGTCGA GATCGAGGAC CGCTCGTGGA CGGTCGGCAA GAAGATCCAG
GTCGCCCACG ACGACAAGGT GCCCTACATG ATGGTCATCG GCGACGACGA GGAGGCAGCC
GGGACCATCT CCGTCCGGGA CCGCAAGGAG CGCGAGGAGA AAGACCTCGA ACTGGCCGAC
TTCGAGCAGC ACCTCGAACG CGAGGTCGAG CAGAAGCGCA CCGCCGTCAC GTACCTCGTG
TAG
 
Protein sequence
MSTVTVTLPD GSPLELEVGA TVEDAAYEIG PGLGSDTVAG VVDGELVDKH TPLPDDADLE 
IVTDGADEYV DVLRHSAAHV FAQALQRLYP EAELTLGPWT DDGFYYDVTG VDLDEDDLED
IEEEAHEIIA EDLDIERVML DREAALDRYE DNEYKQEILA TEAAGEDPVS FYEQGEFYDL
CQGPHVESTG EIGGFALLEM SASYWRGEED NDTLTRVYGT AFPTEEELDE YLERRQKAKE
RDHRKIGQEM DLFSIDETTG PGLPLYEPNG KTVLNELSEY VADLNREAGY DEVETPHVFR
TELWKKSGHY DNYVDDMFLL DVNDEEYGLK PMNCPGHATI FDQKSWSYRD LPIRYFEDGK
VYRKEQRGEL SGLSRTWSFT IDDGHLFVRP DQIEAEVLSI MDIILDILDT FSLDYTVQFA
TRPEKSTGSD EIWEKAESQL EAVLEQEGID YVVEEGDGAF YGPKIDFAFE DALGRHWDGP
TVQLDFNMPD RFDLTYTGED NEDHRPVMIH RALYGSYERF FMVLIEHYNG KFPPWLAPEQ
VRILPVSDDN IDYCEEIAAE LDDFRVEIED RSWTVGKKIQ VAHDDKVPYM MVIGDDEEAA
GTISVRDRKE REEKDLELAD FEQHLEREVE QKRTAVTYLV