Gene Hmuk_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1388 
Symbol 
ID8410908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1315221 
End bp1315658 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID645019719 
ProductUspA domain protein 
Protein accessionYP_003177216 
Protein GI257387443 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.120958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.124251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGT ACGACGACAT TTTGCTGCCG ACCGACGGAA GCAAGGGCAC CGAAGAGACC 
GTTGGCCACG CGCTCACGCT GGCCCGGAAC CACGACGCGA CGCTGCACGT CCTGTACGTG
GTCGACCGTC GGCGCTTCCT CGCGGCCGAC AAGGAGACCC AGGACGACGT GATCGAGGCG
CTGCGCGAAC AGGGCGAGGT CGCGATCGAC GACGTGACAG TCACCGCCGA GGACGCCGGG
GTGACGGTCG AGACCGCGAT GGAGGAGGGG ATTCCGCACA AGACGATTCA GAAGTACGCG
ACGAACAACG ACGTCGACGT GGTCACGATG GGGACCCACG GCCAGACGGG TCGTGATCGG
GTCGCCACGC TCGGCAGCGT CACCGAACGC GTCTTGAAGG GCGTCGACGT GCCGGTGCTT
GTCGTCAACA TCGAGTGA
 
Protein sequence
METYDDILLP TDGSKGTEET VGHALTLARN HDATLHVLYV VDRRRFLAAD KETQDDVIEA 
LREQGEVAID DVTVTAEDAG VTVETAMEEG IPHKTIQKYA TNNDVDVVTM GTHGQTGRDR
VATLGSVTER VLKGVDVPVL VVNIE