Gene Hmuk_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1382 
Symbol 
ID8410902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1308330 
End bp1309475 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID645019713 
Productpeptidase S26B, signal peptidase 
Protein accessionYP_003177210 
Protein GI257387437 
COG category 
COG ID 
TIGRFAM ID[TIGR02228] signal peptidase I, archaeal type 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.287318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGTTC GCGCGACCGT CGGGACCGCG CTCGAAGTGG CCGCGATCGT CGCCGTCGCG 
GCGCTGGTAC TCGGGGCGAT CCTCGGCCAG CCGATCCTGT TTTCGTACGT CGAGACGGGG
AGCATGGAAC CGACGATCGA CACCGGCGAC GGCTTCGTCG CGGTGCCGTC GATCCTCGCC
GGAAGCGTCG ACGAAGGTGA CGTGATCGTC TACGAGGCCA GAGAGCTCCA GGGCGGTGGG
CTGACCACCC ACCGCGTCGT CGGCGAGACC GACGAGGGAT ACATCACGAA GGGCGACGCC
AACCCCTTTA CCGACCAGGA CGGTCCCGAG CCGCCGGTGA CCGACGATCA GATCGTCGCC
CACGCGCTCC AGATCGACGG CACGGTCGTC GTCATCCCGG CGCTCGGCGT CGGAGTCGGT
GCGGTCCAGG ACGGCATTCT CGCGCTGCAG TCCGGCTTCG CCGAGCTCGT CGGCTTCGGC
GATTCGCTGG ACCGGCAGGG CTCGGGTGTC CTCCTCTTTG CCGTGGGGTT CGTACTGTTT
GCCCTCACGC TCGTGGTCGA CGACGAACGA AAGCGCAGCA CCGATCGTTC GCGCGACCGC
CCCGGACTGC TCGACGCGCG AACGGCGACG ATACTGCTGG TGCTCGCAGT GCTGGTCCCG
GCCAACGCCG CCATGCTCGC GGGCGGCGGA ACGCAGGAGC TGGTCGTCGA CGGCGACACC
GTCGCCCAGA GCCCAGACAT CGTCCCCGGC GACGACGCCA CCTGGGAGAT CGGTGTCGAC
AACTACGGAC TGGTCCCGAT CGTGCTCGTG TTCGAGGGAG AGAGTGCCGG CACCAGCGTC
CTCGACGAGC AACTGACCGT AGGGCCCGGA CAGGCCGCGA CGCTGTCGGT GTCGGCGACC
GCACCCGAAC CGGGCGAGCA GACGGTCCTG TCGGTGACGG AGTATCGCTA TCTCCACGTG
CTGCCCGCCC CGGTCGTCGC CACACTCCAC GAGCGACACC CGCTGCTCGC ACTCGCCGCG
GTCAACGCCG TGCTGGTGGG CGTCACGACG CTCGTGGTGA GTCGCGTCGT CGGGTTCCGG
ACCGTCAGGG TCCGCGAGGG CGGGAACGCG TCACTGGGGA CCAGACTCCG CCGTCGTCTG
GACTGA
 
Protein sequence
MSVRATVGTA LEVAAIVAVA ALVLGAILGQ PILFSYVETG SMEPTIDTGD GFVAVPSILA 
GSVDEGDVIV YEARELQGGG LTTHRVVGET DEGYITKGDA NPFTDQDGPE PPVTDDQIVA
HALQIDGTVV VIPALGVGVG AVQDGILALQ SGFAELVGFG DSLDRQGSGV LLFAVGFVLF
ALTLVVDDER KRSTDRSRDR PGLLDARTAT ILLVLAVLVP ANAAMLAGGG TQELVVDGDT
VAQSPDIVPG DDATWEIGVD NYGLVPIVLV FEGESAGTSV LDEQLTVGPG QAATLSVSAT
APEPGEQTVL SVTEYRYLHV LPAPVVATLH ERHPLLALAA VNAVLVGVTT LVVSRVVGFR
TVRVREGGNA SLGTRLRRRL D