Gene Hmuk_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1369 
Symbol 
ID8410889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1294416 
End bp1296209 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content69% 
IMG OID645019700 
Producthypothetical protein 
Protein accessionYP_003177197 
Protein GI257387424 
COG category 
COG ID 
TIGRFAM ID[TIGR02226] N-terminal double-transmembrane domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.440453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCTCT CGGACGTTTT GCTCGCCCCT CTGGGACTGG CGGCCCTCCT CCTGGCAGTG 
CCGATCGTGG TGTTGTATCT CGTTCGCCCG GACCCACAGG AGCTCACGCT GCCGACGTTC
CGGTTTCTCG TCGCCGGTGA ACGCCAGCAG TCGTCGACGC CGTTTCTCGA ACGGATTTCA
CGGAGTCTCC TCCTGGTGTT GCAGGTGCTC GTCGTGCTCG TGCTCGCGGT CGGACTGGCG
ACGCCGTACG TCACCGTCTC CGAGCGGGCG ACGGTCGAAG AGACGGTCGT CGTCGTCGAT
ACGAGCGCGT CCATGCAGAC CGAGGCCGAC GGCGAGACAC GCTTCCAGCG GGCCGTCGCG
GCCGCCCGAG GGGCGGTGAC GGGGTCGACC TCTGTCGTTA CCACGACCGA CGGGGGTGAG
GTGCTGCTCC AGCGGGGCAC GCCGACGACG GCTCGGGAGA CGCTGGCGGG GCTCGACCCG
ACAGATGCAC CGGGGACGCT CGGCGGCGCT GTCTCACAGG CCGCGTCGCT CGCCGGTGAG
AACGGCAGGA TCGTCGTTCT GAGCGACTTC TCGGGCGAGG AGTGGACGAC CGCAGTCACG
ACGGCGCGGG GACGGGGCCT CTCCGTCGAC CTCCGGCAGT TCGACCGCGG CGGCGGGGGG
AACGTCGGCT TCGTCGACCG CCGGTTCACC GGCTCGGAGG TGACGCTGTC GGTGAAAAAC
TACGGCGACT CGACCGTCAC GCGGACCGTC CGGCTCGGCG ACGCCCAGCG CGACCTGCAG
CTCGGACCCG ACGACGTCGG CTCGGTGACG ATGCCGGTCC CGGCCGGCGG GAGCGAGGCC
CGGCTCGGTC CGGGCGACAG CTTCCCGACG GACGACAGCG TCTACGTCGC CGCGCCGCCG
GACGCGGCCG TCGACGTACT GGTGGTGACC AACGACCGGA ACCGGTATCT CACCACCGCG
CTGTCGGTGG TCGACGCGGT GAACGTGACG GTCAGGCAGC CGCCGACGAC GATCCAGGCC
GAGTACGACG TCATCCTGTA CAGCAACGTC GACCCGAACG CGCTGTTGCC CGGCAACGTC
GAAACCGGGC GCGAACTGGT CGAAGACGGT GGCGGCGTGG CGGTGCTGGC ACAGGACGAT
CTCCCACAGC GGTACCGGGA CCTCCTCCTC GTCGACCCCG GCGAGACCCG AACGGGCGCG
ACAGTGACAC GGACGGCACA GACACAGCTC ACCCGCGGCA TCGACTTCCA GCCCCCACAG
GAGTACGTTG CGGGCTCGCT GCGCTCGGGC TCGGTCCAGG TGGGGTTGAG CGACGGGACG
CCACTGATCG CGACCGACGA CCGAGACGGT GGCCGCGTCA TGTACTACGG CTACATCGAG
GATCGGTCCA GCTTCAAGTT CAACTATCAG TATCCCGTGT TCTGGAAGCG GGCAGTGTAC
TACCTCGCGG ACAGGGAACC GCTGCCGGCC CTGAACCACG AGACCGGCGA GACGGTGCGG
TTCGGAAACA CCACCGTGGA GGGGCCGGAC GGCTCCGTCA CCGGCAACGC AGTCTCGCTC
CAGCGAGCCG GCCACTATCG GAGCGAGAGC CGGCAGGAGA GCGCGTCGCT GCTGGACGAG
AGCGAGTCGA ACACCGCCAT CGAAGCGCTC GATCGGCGCA CCGGGACGGC CGGGAACCTC
ACCCGGACCG AACGGCGGTC GGTGCCACAG CCGTTGACCG AGTACTTCGC ACTGGGCGGG
CTGGTGCTCG TGCTGGCCGA GATCGGCTAT CTTCGCCGAC GGGGTGATCT CTGA
 
Protein sequence
MVLSDVLLAP LGLAALLLAV PIVVLYLVRP DPQELTLPTF RFLVAGERQQ SSTPFLERIS 
RSLLLVLQVL VVLVLAVGLA TPYVTVSERA TVEETVVVVD TSASMQTEAD GETRFQRAVA
AARGAVTGST SVVTTTDGGE VLLQRGTPTT ARETLAGLDP TDAPGTLGGA VSQAASLAGE
NGRIVVLSDF SGEEWTTAVT TARGRGLSVD LRQFDRGGGG NVGFVDRRFT GSEVTLSVKN
YGDSTVTRTV RLGDAQRDLQ LGPDDVGSVT MPVPAGGSEA RLGPGDSFPT DDSVYVAAPP
DAAVDVLVVT NDRNRYLTTA LSVVDAVNVT VRQPPTTIQA EYDVILYSNV DPNALLPGNV
ETGRELVEDG GGVAVLAQDD LPQRYRDLLL VDPGETRTGA TVTRTAQTQL TRGIDFQPPQ
EYVAGSLRSG SVQVGLSDGT PLIATDDRDG GRVMYYGYIE DRSSFKFNYQ YPVFWKRAVY
YLADREPLPA LNHETGETVR FGNTTVEGPD GSVTGNAVSL QRAGHYRSES RQESASLLDE
SESNTAIEAL DRRTGTAGNL TRTERRSVPQ PLTEYFALGG LVLVLAEIGY LRRRGDL