Gene Hmuk_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1353 
Symbol 
ID8410873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1278397 
End bp1279764 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content70% 
IMG OID645019684 
Productnatural resistance-associated macrophage protein 
Protein accessionYP_003177181 
Protein GI257387408 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID[TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.573768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0815096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCA GCACTCTTTT ATGTCCGACC GTGAAGGTGT GGGCAATGAG TGGTGAAACG 
ACTGCGGCAA CGAGATTCGG GCGTGGGACA GTCCGTTCGT ACGTCGACGA GATGGGGCCG
GCGTGGGTCG CCGGTGCGAT CGCTGCCGGC CCGGCGACGA TGGGGAGCCT GCTGTCGGCG
GGGGCCGGCT TCGGCTACAC GCTGCTGTGG GTCGTGATCG TCTCCGCGGG GGCGGGCGCG
CTCTCGCAGT TCCTGGCGAT GCGGCTGGGC CTGCTGACCG AGCGCGGCAT CGTCGCCGTC
GTCGAGGACG CGCTCGGTGA GAGCTGGGCG TGGCTGCTCG TGGCCGACGC GGTGCTGGCC
TCCGGTGTCG CACAGCTGGT GATCATGAAG ACCGTCGCCG GGGTTTCGGC GACGATGACC
GGGATCGACG CCGGCATCTG GGGCGTGATC TGGGGGCTCG TCCTCGCCGT CGGACTGGCC
GGGCGGGGCT ATCGCTTCCT CGAACTCGCC GCGAAGCTGC TGGTGTCGCT GGTGGTCCTC
GCCTTCGTCG CCTCGCTGTT CGTCGTCCCG ATCGACGCGG GTGCGGCCGC GGCCGGACTC
GTTCCGTCCC TGCCCGCCGG AAGCGCGGTG ATGGCGGCCG GCATCGTCGG CGGGGCCGTC
CACATCACGC TCATCACGAT GCACTCCTAC ACGATGCGGG CCCGCGGGTG GACCGAGCGA
GACAGCGACC TGGCGACGTT CGACATCGGC GCGTCGATGC TGCTCGTCTT CGGGCTGTAC
AGCCTGGCGA TCTTCCTGGT CGCCGCGAGC GTCCTCACGT CGACGGATCT GACGACGATC
GGCGCGGCAC AGGCGCTGGG TCCGATCGCG GGGGACAGCG CCCAGTGGCT CTTCCTCGTC
GGCCTGGCCG GCGCGGCCGT CTCGACGCTG GGTGCGAACA CGATCGTCCC GCCCTTCCTG
ATCGCCGACA AGTTCGGCTG GGACACCGAC GTGAGCGACG CCCGCTACCG GGCGCTGCTG
GTCGGCGTCG CGCTGCTGTC GATCCCCGGT GCGTTCATCC CCGGCAACGT GCTCGGACAG
CTGGTGTTGA TCCTGGCGGT CGGCACGCTC GGGACGCCCT TCGCGATCGC GATCGTCCTC
TACCTGCTCA ACACCGACAC GGTCTCGCGG CAGAACTCGA CGGCGACCAA CCTCGGCGGC
GTCGCGCTGC TCGCCGTCAC CGGCGTGCTC GCGGCGAACT TCGTCCGCGA ACAGGTGGCT
GCCGGCGTCG GTCCGCTCTC CGGGTTCGTC GTGACCTTCG GCGCGGCGAT CGCGCTGGCG
ACGCTCGTCC TCGGGGGCAA GTACGTCCGC GAGGAACTGC TGGCCTGA
 
Protein sequence
MRFSTLLCPT VKVWAMSGET TAATRFGRGT VRSYVDEMGP AWVAGAIAAG PATMGSLLSA 
GAGFGYTLLW VVIVSAGAGA LSQFLAMRLG LLTERGIVAV VEDALGESWA WLLVADAVLA
SGVAQLVIMK TVAGVSATMT GIDAGIWGVI WGLVLAVGLA GRGYRFLELA AKLLVSLVVL
AFVASLFVVP IDAGAAAAGL VPSLPAGSAV MAAGIVGGAV HITLITMHSY TMRARGWTER
DSDLATFDIG ASMLLVFGLY SLAIFLVAAS VLTSTDLTTI GAAQALGPIA GDSAQWLFLV
GLAGAAVSTL GANTIVPPFL IADKFGWDTD VSDARYRALL VGVALLSIPG AFIPGNVLGQ
LVLILAVGTL GTPFAIAIVL YLLNTDTVSR QNSTATNLGG VALLAVTGVL AANFVREQVA
AGVGPLSGFV VTFGAAIALA TLVLGGKYVR EELLA