Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1349 |
Symbol | |
ID | 8410869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1274803 |
End bp | 1275642 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645019680 |
Product | HTR-like protein |
Protein accession | YP_003177177 |
Protein GI | 257387404 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0330184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGCA TCCCGTTCGG CGTTCGCCAG CTCGACACCA CCATCAAGGG GGGTGCTCCG ACGGGCAGCG TCGTCCTGGT CTCGGGCGAG TCCGGTGCCG GATCGCGGGA GTTCATGTAC ACGAGCGCGC TCATCAACGG GCTCTCGGCC GGCGACAGCG ACGAGCTGTA CGACCTCTAC TACGGGTCGC CCACGGCCGA CGCGGTCGAT CCCGACGCCG TCCACTACAT CTCGTTTACC GCCTCGAAGG AGGATCTGGT CGACGAGATG CGCCTGGCGA TGGACGACGA GATCGTCGAC AACGGCTCCG AAGCGATTCA GTTTCACGAG CTGACAGAGC GGTACTTCCA CGTCAGTCCG GTGCCCCGCG ACTGGTACGC CGACGCCACC GAGAGCATCA CCGATCTGCG CAAGCGCCAC GAGCGCCAGG GGTTGTTGGA GGCCCTCGGG AGCAAGCTCA GCGAGATCGC GCCGAACAAC CTCGTCGTCA TCGACTCGCT GTCCGATCTC GTCGGGGCGA TCGGCGACGA CATGGAGTGG TCGGACATCA GCTACCTCGT CCAGGGGCTC ACCAAGGCCG CGAACCGCTG GAACGGACTC ATCCTGGTCC ACCTGAACCA CGAGACGGTG TCCTCGACGC GGTACGCCCA ACTGACCGAC GCGACGACCG GCGCGATGCG TTTCGAGTGG GAGTCCGGCG GTTCGACGCG GGCACGGACA CTCGTCGTCT CGCAGTTCCG GGGCGTCCTC TCGCAGATCG AAGACGAGAA CATCGTCCGT TTCGAGACCG AGATCGGCGA CAGCGGCTTC GACATCAGTG ACGTGCGCAA GATCCGATAG
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Protein sequence | MDRIPFGVRQ LDTTIKGGAP TGSVVLVSGE SGAGSREFMY TSALINGLSA GDSDELYDLY YGSPTADAVD PDAVHYISFT ASKEDLVDEM RLAMDDEIVD NGSEAIQFHE LTERYFHVSP VPRDWYADAT ESITDLRKRH ERQGLLEALG SKLSEIAPNN LVVIDSLSDL VGAIGDDMEW SDISYLVQGL TKAANRWNGL ILVHLNHETV SSTRYAQLTD ATTGAMRFEW ESGGSTRART LVVSQFRGVL SQIEDENIVR FETEIGDSGF DISDVRKIR
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