Gene Hmuk_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1349 
Symbol 
ID8410869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1274803 
End bp1275642 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID645019680 
ProductHTR-like protein 
Protein accessionYP_003177177 
Protein GI257387404 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0330184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCA TCCCGTTCGG CGTTCGCCAG CTCGACACCA CCATCAAGGG GGGTGCTCCG 
ACGGGCAGCG TCGTCCTGGT CTCGGGCGAG TCCGGTGCCG GATCGCGGGA GTTCATGTAC
ACGAGCGCGC TCATCAACGG GCTCTCGGCC GGCGACAGCG ACGAGCTGTA CGACCTCTAC
TACGGGTCGC CCACGGCCGA CGCGGTCGAT CCCGACGCCG TCCACTACAT CTCGTTTACC
GCCTCGAAGG AGGATCTGGT CGACGAGATG CGCCTGGCGA TGGACGACGA GATCGTCGAC
AACGGCTCCG AAGCGATTCA GTTTCACGAG CTGACAGAGC GGTACTTCCA CGTCAGTCCG
GTGCCCCGCG ACTGGTACGC CGACGCCACC GAGAGCATCA CCGATCTGCG CAAGCGCCAC
GAGCGCCAGG GGTTGTTGGA GGCCCTCGGG AGCAAGCTCA GCGAGATCGC GCCGAACAAC
CTCGTCGTCA TCGACTCGCT GTCCGATCTC GTCGGGGCGA TCGGCGACGA CATGGAGTGG
TCGGACATCA GCTACCTCGT CCAGGGGCTC ACCAAGGCCG CGAACCGCTG GAACGGACTC
ATCCTGGTCC ACCTGAACCA CGAGACGGTG TCCTCGACGC GGTACGCCCA ACTGACCGAC
GCGACGACCG GCGCGATGCG TTTCGAGTGG GAGTCCGGCG GTTCGACGCG GGCACGGACA
CTCGTCGTCT CGCAGTTCCG GGGCGTCCTC TCGCAGATCG AAGACGAGAA CATCGTCCGT
TTCGAGACCG AGATCGGCGA CAGCGGCTTC GACATCAGTG ACGTGCGCAA GATCCGATAG
 
Protein sequence
MDRIPFGVRQ LDTTIKGGAP TGSVVLVSGE SGAGSREFMY TSALINGLSA GDSDELYDLY 
YGSPTADAVD PDAVHYISFT ASKEDLVDEM RLAMDDEIVD NGSEAIQFHE LTERYFHVSP
VPRDWYADAT ESITDLRKRH ERQGLLEALG SKLSEIAPNN LVVIDSLSDL VGAIGDDMEW
SDISYLVQGL TKAANRWNGL ILVHLNHETV SSTRYAQLTD ATTGAMRFEW ESGGSTRART
LVVSQFRGVL SQIEDENIVR FETEIGDSGF DISDVRKIR