Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1343 |
Symbol | |
ID | 8410863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1269157 |
End bp | 1269576 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645019674 |
Product | UspA domain protein |
Protein accession | YP_003177171 |
Protein GI | 257387398 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.292273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.588543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTCGC GAGTCCTCGT TCCGATGGAC GATTCGGAAA TGGCGCATCG AGCCCTTGAG TATGCTCTTG AGAACCATCC GAACGCAGAA ATCACCGTCT TGCATGTCGT GGGAGAACCG TCAGCGATGG GAGGGAAAGC CACCGCACTC GCTCTTGAGG ACGATATCGA AGCGGCTGCC CAGGAGCGCG CACAGGAGGT GTTCGATGAC GCTCGTGATT TCGCCGCTGA GTACGATGTC GAGGTTACTA CCGAGGTTCA ACTGGGGCAT CCGGCGCGGG CGATTCTAAA CAAAGCCAGC GATTTCGATG CGGTCGTAAT CGGAAGTCAC GGCGGCTCGA TGATTGACCG GCTGGTCATC GGGAACGTCG CCCAGAAAGT GTTCCGCAAC TCGCCTGTCC CTGTAATTGT CGCTCGGTGA
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Protein sequence | MLSRVLVPMD DSEMAHRALE YALENHPNAE ITVLHVVGEP SAMGGKATAL ALEDDIEAAA QERAQEVFDD ARDFAAEYDV EVTTEVQLGH PARAILNKAS DFDAVVIGSH GGSMIDRLVI GNVAQKVFRN SPVPVIVAR
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