Gene Hmuk_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1329 
Symbol 
ID8410849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1256147 
End bp1257154 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID645019660 
Productputative deoxyhypusine synthase 
Protein accessionYP_003177157 
Protein GI257387384 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1899] Deoxyhypusine synthase 
TIGRFAM ID[TIGR00321] deoxyhypusine synthase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.644418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACGAGCGAGA AACCTTCAGT CACGACCCGA TCGATCACGC GGACGTTCGG 
GGCGGGATGA CCGTCGGCGA ACTGGTCGAG CAGTACGGCG CGGCGGGGAT CGGTGCGGCG
GACCTCCACG AGGCCGTCGA CATCTTCGCG GCGATGTGTG ACGACGACGT GACGACCTTC
CTCGGGCTCG CGGGTGCGAT GGTGCCCACG GGGATGCGTC AGATCGTCGC CGATCTGATC
CGGGACGGCC ACGTCGACGC GCTGGTGACG ACGGGCGCGA ACCTCACCCA CGACACCATC
GAGGCCATCG GCGGCAAGCA CCACCACGGA AAGGTCCACG CCGAAGGCAA GTCCGAACGC
GAGCACGACG AGACGCTGCG CGACGAGGGC GTCGACCGCA TCTACAACGT CTACCTCCCG
CAGGAACACT TCGCGCTGTT CGAGTCGCAC CTCCGCGACG AGGTCTTTCC CGTCCTCGCC
GAGGAGTGTG ACGACGGCGG CGTCTCCATC CAGCGGCTCA CCGAGGAGCT GGGGCGGGCC
AACGCCGAGG TCAACGAGTC CGAAGACATC GACGAGGGGG CCGGCATCGC CGCCGCCGCC
TACGAGCACG ACGTGCCGAT CCACTGTCCG GCCGTCCAGG ACTCCGTGCT GGGGCTCCAG
TCGTGGATGT ACTCACAGAC CTCGCCCTTT ACCCTGGACG CGCTGGGGGA CATGACCGCG
ATCACCGACC TGGCCTACGA GGCCGACGAG GCCGGCGCGC TGGTCGTCGG CGGCGGCGTC
CCGAAGAACT ACGTCCTCCA GACGATGCTG GTCTCGCCCG ACGCCTACGA CTACGCGGTC
CAGCTGACGA TGGACCAGCC AAACACCGGC GGCCTCTCCG GCGCGACGCT GGACGAAGCC
CGATCCTGGG GGAAACTGGA GAAGGCCGCC CGCAACGCCT CGGTGTACGC CGACGCGACG
ATCACGCTGC CGCTGCTGGT CGCCGGAGCC CGCGAGCGAA TCGAATAG
 
Protein sequence
MSDDERETFS HDPIDHADVR GGMTVGELVE QYGAAGIGAA DLHEAVDIFA AMCDDDVTTF 
LGLAGAMVPT GMRQIVADLI RDGHVDALVT TGANLTHDTI EAIGGKHHHG KVHAEGKSER
EHDETLRDEG VDRIYNVYLP QEHFALFESH LRDEVFPVLA EECDDGGVSI QRLTEELGRA
NAEVNESEDI DEGAGIAAAA YEHDVPIHCP AVQDSVLGLQ SWMYSQTSPF TLDALGDMTA
ITDLAYEADE AGALVVGGGV PKNYVLQTML VSPDAYDYAV QLTMDQPNTG GLSGATLDEA
RSWGKLEKAA RNASVYADAT ITLPLLVAGA RERIE