| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1315 |
|---|
| Symbol | |
|---|
| ID | 8410835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1243509 |
|---|
| End bp | 1243967 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645019646 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003177143 |
|---|
| Protein GI | 257387370 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1439] Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.962808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACATTC TGGACTCCTC GGCGTTTATC AACGAGTATC ACACCGACGA GCCGATCGCT
TCGATTCCGC TCGTCCGCGA GGAACTCGAA GACGAGAGCG CCTACCGCTT CGACGCGCTG
GAAGGGTCGG GGATGCACAT GCACATCCCC GAACCCGAGA CCGTCGAACG GGTCGAGCGG
GCCGCCGACG AGACCGGCGA CCTCGCGGAA CTCTCCCAGA CCGACGTTCG CCTGATCGCC
GCCGCGTTCG AACTCGACGG GCGGCTGGTC ACCGACGACT ACGCGATGCA GAACGTCTCG
GAGAAGCTCT CGGTCGCCGT CGAAGTGATC GCACAGGACG GCATCGACGA GCAGCGCGAC
TGGCGTTTCC AGTGTCAGGG GTGTGGACGC GAGTTCGACG AGAACCACGA CCGCTGTCCG
ATCTGTGGCA GCGATCTCTC GCGAAAGAAT CCGGCTTAA
|
|---|
| Protein sequence | MYILDSSAFI NEYHTDEPIA SIPLVREELE DESAYRFDAL EGSGMHMHIP EPETVERVER
AADETGDLAE LSQTDVRLIA AAFELDGRLV TDDYAMQNVS EKLSVAVEVI AQDGIDEQRD
WRFQCQGCGR EFDENHDRCP ICGSDLSRKN PA
|
|---|
| |