Gene Hmuk_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1309 
Symbol 
ID8410829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1239615 
End bp1240085 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content70% 
IMG OID645019640 
ProductPyruvoyl-dependent arginine decarboxylase 
Protein accessionYP_003177137 
Protein GI257387364 
COG category[S] Function unknown 
COG ID[COG1945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00286] arginine decarboxylase, pyruvoyl-dependent 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.273343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTA TCCGGATCGT CTGGGGGACT GCCGGCGGCC CCACAGAGCT GTCGTCGTTC 
GACGCCGCGC TGGCCGACGC GGGCATCCAC AACTACAACC TCGTGACGCT GTCGTCGGTC
ATCCCGGCGG ATCCGGAGAT CGAAGTCGTC GGCACCGCCC CGGATCTGGG GCCGGTCGGT
GCGGAACTCC ACACCGTCGA GTCGTCTGCG ACGGCCGCGC CCGGCGAACG TGTGGCGGCG
GGGATCGGTT GGTCGCGAAG CGAGTCCGGC CGCGGCATCT TCTACGAGGT CTCCGGCGAG
GACCCCGACG ACGTGCGGGC AGAGATCGAG GCGGGACTGG CGGCCGGCCG CCAGCTCCGA
GACTGGACGT TCGTCGACAC GGAGACGGTC GTTCGGGCGG TCGAGGCCGA CGAGGAGTAC
GCTAGCGCCG TCGTCTGTGC CGCCTACGGG AGAAGCCGGC TAGGGCTGTA A
 
Protein sequence
MSVIRIVWGT AGGPTELSSF DAALADAGIH NYNLVTLSSV IPADPEIEVV GTAPDLGPVG 
AELHTVESSA TAAPGERVAA GIGWSRSESG RGIFYEVSGE DPDDVRAEIE AGLAAGRQLR
DWTFVDTETV VRAVEADEEY ASAVVCAAYG RSRLGL