Gene Hmuk_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1306 
Symbol 
ID8410826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1235853 
End bp1237643 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content65% 
IMG OID645019637 
Productoligoendopeptidase F 
Protein accessionYP_003177134 
Protein GI257387361 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1164] Oligoendopeptidase F 
TIGRFAM ID[TIGR00181] oligoendopeptidase F 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.479307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGG TGCCCGACAG ATCGGAGATC GAGACGCAGT ACAAGTGGGA TCTCGAATCG 
CTGTACGCGA CCGACGACGA CTGGGAAGCC GCGTACGAGC GGGCCGAGGA ACTCGTCGAA
GAGCTGGCGG CCTACGAGGG GCGTGCGACC GACGACGCCG GGACGCTGCT CGCGACCCTC
GAAACGTACG AGGAGCTGAT GCGCACCGTC GCCAACGTCG CCTCCTACGC CCGGATGCGG
AAAGACGAGG ACACCACCCG GGACCAGTAC CAGGCGTTGA CGGCCCGTGC CCAGTCGCTG
TCCTCGGAGG CCTCCAGCGC GGCGAGCTTC CTCGAACCGG CCCTCCAGGA TCTGGCGTGG
GACGACATCG AAGCGATGAT CGACGCGGAG TCGCCCCTCG AACAGTACGA GCACTACTTC
GACGACGTGC TCCGGATGAA AGACCACACC CGCTCGCCGG AAGTCGAGAA CCTGCTGGCG
GAACTGAGCG AGGTCACCGG CGCGTCGGGC GAGGTGTACA ACATGCTGGC AAACGCCGAC
ATGGAGTTCC CGAGCGTCGA AGACCCGGAC GGGGAACCCC AGCCGATCAC GCTGAACAAC
TTCACGACGC TCCAGAAACG CCCGGACCGG GACTTCCGAC AGCGCGTGTA CGAGACCTTC
TACGACGAGT GGGATGGGGT CCGCAACGCC GTCGGCGCGG CCTACAAGAA CAGCGTCAAG
ACAGACGTGA AGATGGCCCA GGCCCGCAAC TACGACACCG CCCGCGAGGC CGCACTGGAC
GGCCCGAACG TCCCGGTCTC GGTCTACGAC ACGCTGGTCG ATACGGTTCG GGACAACCTC
GACGCTCTCC ACCGCCACGC CGAGCTGAAG CGCGACGCGA TCGGGGCCGA TGAACTGGAG
ATGTGGGACC TCTACGTCCC GCTCGTTCAG GAGGAGTCGC CCGAGATCGA GTACGAGCAG
GCCTGCGAGT ACGTCGTCGA CGCCGTCGCG CCGCTGGGCG ACGACTACCA GTCTCGCGTC
TCGGAGGGGC TGGACTCGCG GTGGGTCGAC GTCTACGAGA CCGCCAACAA GCAGTCGGGC
GCGTACTCCG GCGGGACCTA CGACTCCCAG CCGTACATTT TGATGAACTA CCAGGACGAC
GTGGAGTCGA TGTACACGCT GGCCCACGAA CTGGGCCACT CCCTCCATAG CGAGTACACC
AGCGAGTCCC AACCGTACGT CTACTCGAGC TACGAGATCT TCGTCGCCGA GGTGGCCTCG
ACGGTCAACG AGACGCTGCT CACCCACCAC CTGCTCGACG TCGTCGACGA CGAGCGGCTC
CGCCGGCACG TCCTCAACGA GTACCTCGAA CGGTTCCGGT CGACGCTGTT CCGCCAGACG
ATGTTCGCGG AGTTCGAGCA CCGCGCCCAC GAGATGAGCG AGGCCGGCGA ACCCCTGACG
CCGGACCGGC TGGACGACCT CTATCACGAC CTCAAGAGCG ACTACTACGC GCCGGCCGCG
GTCGACGACC GGATCGCCCG CGAGTGGATG CGGATTCCCC ACTTCTACCG ATCGTTCTAC
GTCTACCAGT ACGCCACCGG CATCTCCGCG GCCGTCGCGC TGGTCGACAC GATCCTCGAC
GAAGGTGAGC CCGCAGCGGA GCGCTACGTC GACTTCCTCG GCAAGGGCTC GCGGGAGTAC
CCGCTGGAAC TGCTCCAGGA CGCAGGCGTG GACATGTCTA CTTCGGGGCC CGTCGAAGCC
GCGATCGACA CCTACGGCGA CTACCTCGAC GAGTTCGATC AGTTGACCTG A
 
Protein sequence
MSSVPDRSEI ETQYKWDLES LYATDDDWEA AYERAEELVE ELAAYEGRAT DDAGTLLATL 
ETYEELMRTV ANVASYARMR KDEDTTRDQY QALTARAQSL SSEASSAASF LEPALQDLAW
DDIEAMIDAE SPLEQYEHYF DDVLRMKDHT RSPEVENLLA ELSEVTGASG EVYNMLANAD
MEFPSVEDPD GEPQPITLNN FTTLQKRPDR DFRQRVYETF YDEWDGVRNA VGAAYKNSVK
TDVKMAQARN YDTAREAALD GPNVPVSVYD TLVDTVRDNL DALHRHAELK RDAIGADELE
MWDLYVPLVQ EESPEIEYEQ ACEYVVDAVA PLGDDYQSRV SEGLDSRWVD VYETANKQSG
AYSGGTYDSQ PYILMNYQDD VESMYTLAHE LGHSLHSEYT SESQPYVYSS YEIFVAEVAS
TVNETLLTHH LLDVVDDERL RRHVLNEYLE RFRSTLFRQT MFAEFEHRAH EMSEAGEPLT
PDRLDDLYHD LKSDYYAPAA VDDRIAREWM RIPHFYRSFY VYQYATGISA AVALVDTILD
EGEPAAERYV DFLGKGSREY PLELLQDAGV DMSTSGPVEA AIDTYGDYLD EFDQLT