Gene Hmuk_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1296 
Symbol 
ID8410816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1227049 
End bp1228194 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID645019627 
Productpeptidase M50 
Protein accessionYP_003177124 
Protein GI257387351 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGGA CCGACTCGCC GACGACCGCA CCGTCGGTCG AGGACCTCGC GTCCGTCTTT 
CAGGTCTACC AGGTCCGCCG CGACGGGGAT CGGCTCCTCT ACGTCGGACG GCCCCGCGTC
CAGCCAGACG CCGTCGAGCG ACGGCTCTGG GACCGGTTTC GCGAGTCGGG CTACGAGATC
TCGCTGGAGC GAGAGTACGA CACCGACGCC GACACGCCGA TGCCGACCCA CGGCTGGGTC
CTCGTGGCCC GTCCCCACTC CGTCGGGATC GACGGGATCC CCTGGACGAA CATCCTCCTG
GCGCTGTTGA CCACCGCGTC GACGCTGCTG GTCGGTGCCG TCCAGTGGTA CCACGTCGAC
CTCGGCGCGA ACCCGCTCGG GGTCTTCCGC GCCTGGCCGT TCGTGGCGGC CGTCCTCGGC
GTCCTCGCGG TCCACGAGCT GGGACACTAC GTCGCGAGCC GGTACCACGG CGTCGACGCG
AGCCTCCCCT ACTTCATCCC GTTCCCGACG CTGATCGGGA CGATGGGTGC GGTCATCCGC
ATGAAAGGAC GGATCCCCGA TCGCAAGGCG CTGTTCGACA TCGGAGCGTC CGGACCGCTG
GCGGGCCTCG TCGCGACGGT CGTCGTCTCG GCGATCGGGC TCCAGCTCGA TCCCGTCGTT
ACGCAGGATG CGATCGCCGC CGGCTCCGAC GCGCCGGTCG TCCGCTTTCA CAACCCGCTC
CTGCTGGAGC TGATCGCCGC CGCCACCGGT ACACTGGAGA CGCTTCGCTC CGGGACGATC
CACCCGGTCG TCTTCGGTGG GTGGGTCGGG ATGTTCATCA CGTTCCTGAA CCTCCTGCCG
GTCGGGCAAC TCGACGGCGG CCACATCGTC CGGGCGCTGT ACGGCGAGCG CCAGGAGACG
ATCGCCGCTG CCGTTCCCGC GGCGCTGTTC GGGTTGGCTG GCTACCTCTA CTTCCTGCAG
GACGTGACTA ACGCCGTCGG CATCTGGGTC ATGTGGGGGC TGCTGGCGAC GGGACTCGCC
TACGCCGGCC CGGCGACCCC CATCCGGGAC TCGCCGCTCG ACTCCAAGCG GACGCTGCTC
GGCGTCTTCA CGTTCGTCCT GGGGGTCCTC TGTTTCACCC CGGTGCCGTT CGAACTGGTG
ACGTGA
 
Protein sequence
MNRTDSPTTA PSVEDLASVF QVYQVRRDGD RLLYVGRPRV QPDAVERRLW DRFRESGYEI 
SLEREYDTDA DTPMPTHGWV LVARPHSVGI DGIPWTNILL ALLTTASTLL VGAVQWYHVD
LGANPLGVFR AWPFVAAVLG VLAVHELGHY VASRYHGVDA SLPYFIPFPT LIGTMGAVIR
MKGRIPDRKA LFDIGASGPL AGLVATVVVS AIGLQLDPVV TQDAIAAGSD APVVRFHNPL
LLELIAAATG TLETLRSGTI HPVVFGGWVG MFITFLNLLP VGQLDGGHIV RALYGERQET
IAAAVPAALF GLAGYLYFLQ DVTNAVGIWV MWGLLATGLA YAGPATPIRD SPLDSKRTLL
GVFTFVLGVL CFTPVPFELV T