Gene Hmuk_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1263 
Symbol 
ID8410783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1195685 
End bp1196317 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID645019594 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_003177091 
Protein GI257387318 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CGACGGCGAT CTGTTTCGAC CTCGACGGGA CGCTGGTCCA GTACGATCGT 
TCGTTCGACG AGATACTGAC GACGGCCTTC GAACGCGAGA TCGGGACCGC GACCGAGGAG
ATGGTCGAGG CCTACGAGAC CGGTTTCTTC GATACGTTCG AGGAGTGTGA GCCGGAGCCG
TACCACGCGG GGATGCGGGC CGCGCTGGCG GAGGCCGAGA TCGACACCGA CGACGTGAAC
GTCGACGCGC TCGTGGCGGC GCTGCGAGAC GAGGAGCTCG CGGCGACCGG CGTGTCGTCG
GCCGCGCGGG ACTGCCTCTC GGAACTGGGC GCGGACGAGG CGACGACGCT CGTGGTCTGT
AGCGACGGCG TCGGCGAGTG GCAGCGCGCG AAGATCGACC GCCACGACCT CGCAGACTTC
GACGAGACGG TGATCTCCTA CGACGTGGGC GGGCACAAGA CCGACGGCGA CCCCTACGAC
GCCGTCCGCG AGCGTGTCGA CGCCGAGGAG TACGTGATGG TCGGCGACAG CCACGAGTCG
GACGTGGTGG CCGCCCGCGA GGCCGGCTTC GTGCCGGTGC AGTACGAGGA CGCCGAGACG
GACCTGTTCG CGATCCTCAC CGCGATGCTG TGA
 
Protein sequence
MTTTTAICFD LDGTLVQYDR SFDEILTTAF EREIGTATEE MVEAYETGFF DTFEECEPEP 
YHAGMRAALA EAEIDTDDVN VDALVAALRD EELAATGVSS AARDCLSELG ADEATTLVVC
SDGVGEWQRA KIDRHDLADF DETVISYDVG GHKTDGDPYD AVRERVDAEE YVMVGDSHES
DVVAAREAGF VPVQYEDAET DLFAILTAML