Gene Hmuk_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1259 
Symbol 
ID8410779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1192074 
End bp1193123 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content68% 
IMG OID645019590 
Productnucleoside recognition domain protein 
Protein accessionYP_003177087 
Protein GI257387314 
COG category[S] Function unknown 
COG ID[COG3366] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTCAC ACGTCGCCCT CCAGTCGGTC GGGCCGGTCG TCGATCTGCT CTGGGGGACG 
GTGCTCCCGC GGGTGGGAAC CATCGCCGTC ACGCTGGCGC TGGGCGTGTT CCTCGCCGAC
CTCGCCGTCG CCTTCGGGAT CGTCGAGTAC ATCGCGACGC TCTCGAAGTA CCTCACCGAA
CCGGCGAATC TCCCTCGCGA GGTCGGGACG GCGATCCTGG CGACGACGGC CTCGCCGACC
GCGGGCTACG GGATGCTCGC GGAGTTTCGC GAGTCGGGCG TACTCGACGA CCGCGCGACG
CTGGTGGCCG TCACCATCAA CACGTTCTTC GGGTTCGCCC AGCACATCTT CACCTTCTAC
GCGCCCGTCC TGATCCCGAT TCTGGGGCTC CGAGTGGGAC TGCTGTACGT CGGCGCTCGC
GCGGCCATCT CGCTGGCGAT CACGCTCGTT GGCATTCTCG CAGGCGCACT CTTGCTCTCG
AATCGCAACG TCGACCGCAG CCGGATGCCC GAGGTGGCGG ACCCGACCGA GGAGCACGGC
ACCGCTCGCG AGAAGCTCCG GGACGCGGCG GCGTCGACCG CCGAGAAGCT CCGGGACATC
CTGCCGCGCC TGCTGGTCAT CTACGCGATC GTTGCGGTGC TGGTCGCGTG GCGCGAGATC
CCCGCACTGG TGACGCTCGT GGCGGTGCTG AGCGAGTCGA GCGCTGGGGG TATCGTCCCG
TCGCTCTCCG AAAGTGTCGG CACGTTCACA AGCGCCGTCG GGCTGCCAAG CGCCGCCGTC
GGCGTCGTCG CGGTCTACAC CATCGACACC ACCAACGGCT CGATCGTCCT CGCGCCGTTC
GTCGAGAACG GGACCTTCAC CCCTCGTCAG GCCGTCGCGA CGATGCTCGT CGGCGGGATC
GTCTCCTTCG CCGTCTCGAC GTTCAAGCGC TCGATCCCGT TCCAGTACGG CATCTGGGGC
GCGGAGTTCG GTTCGAAAGT GATCGCCGTC AACACGACGC TGAAGATCGT GTTCATCGCA
CTCGCGGTGG TCCTGTTGCT CGTCCCCTAG
 
Protein sequence
MQSHVALQSV GPVVDLLWGT VLPRVGTIAV TLALGVFLAD LAVAFGIVEY IATLSKYLTE 
PANLPREVGT AILATTASPT AGYGMLAEFR ESGVLDDRAT LVAVTINTFF GFAQHIFTFY
APVLIPILGL RVGLLYVGAR AAISLAITLV GILAGALLLS NRNVDRSRMP EVADPTEEHG
TAREKLRDAA ASTAEKLRDI LPRLLVIYAI VAVLVAWREI PALVTLVAVL SESSAGGIVP
SLSESVGTFT SAVGLPSAAV GVVAVYTIDT TNGSIVLAPF VENGTFTPRQ AVATMLVGGI
VSFAVSTFKR SIPFQYGIWG AEFGSKVIAV NTTLKIVFIA LAVVLLLVP