| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1254 |
|---|
| Symbol | |
|---|
| ID | 8410774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1188171 |
|---|
| End bp | 1188998 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645019586 |
|---|
| Product | putative ISH4 transposase |
|---|
| Protein accession | YP_003177083 |
|---|
| Protein GI | 257387310 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3676] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCCAA TAAGCCGGTT CGTGTCGGAA TCGGCTGCAG CGGACCTGCT GGAACAGGTT
CGCTGGCGTG ATGGCGTCGA GTGCCCCCGC TGCCGTTCTG ACCTGACGGT CAGAAACGGC
AGCTACCGGG TGTATCAACG GTATCTGTGT AAGAATTGCG GTCGCACGTT CAACGACAAG
ACCGACACGA TCTTCGCTCA CTCGAAGCTG AAGCTCAAAG AATGGTACTT CACGATCTAC
GTGTTCTTAC GGTTCAACAC GAGTATTCGG CAAATCGAGG CAGAGCTTGA TTGTTCCTAC
CGGACGGTGA GACGGCACGT CGAGCAGTTC GCCAGAACTC TCGACGCGCC TTCGATTACG
CTGTCTGGAC CGGTCGAAAT CGACGAAGTG TACGTCTCTG CTGGTCTCAA AGGCCGCGAG
CGTGACCAGG AGTCGCGCTC GCGTGGCCTG TCCACGCGTG GACGGGGATC GTACGACGGC
GACAAACCGC CGGTGTTCAC GCTCGTCGAT CGTGGTTCGG ACGAGCGGTA CGTCGTGCCA
GCGAAATCCG CTGACGAATC GACCGTTCGA CTCCTGCTTG CTGACCACGA AGAGGAGTCA
CTGACCGTCT ATACGGACGG ATTTCGGGCC TACGACCCAC TAGAAGACGA CGACTCATTC
ACCCGCAAAT ACGTCGTCCA CAGCGACGGT GAATACGCTG ATGGCGAAGT ACACGTCAAC
GGCTGCGAGA GCCACGCGTC GCTGACGCGA CGGTGGCTCT CGCCCCCATC GAGGCGTCTC
GAAAGACAAG CTAACGCCGT ATCTCAGAGC CTTCGAACTC CGCCGTGA
|
|---|
| Protein sequence | MFPISRFVSE SAAADLLEQV RWRDGVECPR CRSDLTVRNG SYRVYQRYLC KNCGRTFNDK
TDTIFAHSKL KLKEWYFTIY VFLRFNTSIR QIEAELDCSY RTVRRHVEQF ARTLDAPSIT
LSGPVEIDEV YVSAGLKGRE RDQESRSRGL STRGRGSYDG DKPPVFTLVD RGSDERYVVP
AKSADESTVR LLLADHEEES LTVYTDGFRA YDPLEDDDSF TRKYVVHSDG EYADGEVHVN
GCESHASLTR RWLSPPSRRL ERQANAVSQS LRTPP
|
|---|
| |