Gene Hmuk_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1228 
Symbol 
ID8410748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1168397 
End bp1169047 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content70% 
IMG OID645019560 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_003177057 
Protein GI257387284 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.368821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.900551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA AACAGGCCGT CATGGACAGC ATCGTCGACA GCGGCGTCAC CGCAGTCATG 
CGCGGGATTC CCGAGGACGA CATCGTCGAC GTGGCCGAAG CCATCCACGC GGGCGGCGTC
ACCGCACTCG AACTGACCGC CGACGCCAAG CGTTGCAGCG AGATGATCGC GAAGGTCGAC
CGCGCGCTGG CGGGCACGGA CGCCGTCATC GGCGCGGGCA CCGTCATGGA CGGCGCCGCC
GCGCGCAACG TCATCGAGGC CGGCGCGGAG TTCGTCCTGG CACCCAATCT CAACGAGGAG
GTCATGGAAG TGTGCAACCG CGAGAGCGTC GTCGCCATCC CCGGCGTCAT GACGCCGACC
GAGGCCGACG CGGCGATGGC CGCCGGTGCG GACATCCTGA AGATGTTCCC CGCCTCGACC
GTCGGCCCGG ACCACATCGG CGCGCTCCAG GGCCCGCTCG GTGACGTGCC GATCATGCCG
ACCGGCGGCG TCTCCGCGGA CAACGTCGAC GACTACTTCG ACGCCGGTGC GGTCGCGGTC
GGTGCCGGCT CCGCGCTGGT GAACTACGAG GCCATCGAGG CCGGCGACAT GGACGGCGTC
CGCGAGCAGG CCGCGGAGTT CGTCCAGGCC GTCGAAGACG CCCGGAACTG A
 
Protein sequence
MTNKQAVMDS IVDSGVTAVM RGIPEDDIVD VAEAIHAGGV TALELTADAK RCSEMIAKVD 
RALAGTDAVI GAGTVMDGAA ARNVIEAGAE FVLAPNLNEE VMEVCNRESV VAIPGVMTPT
EADAAMAAGA DILKMFPAST VGPDHIGALQ GPLGDVPIMP TGGVSADNVD DYFDAGAVAV
GAGSALVNYE AIEAGDMDGV REQAAEFVQA VEDARN