| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1198 |
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| Symbol | |
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| ID | 8410718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | + |
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| Start bp | 1139503 |
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| End bp | 1140618 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645019534 |
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| Product | NMD3 family protein |
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| Protein accession | YP_003177031 |
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| Protein GI | 257387258 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1499] NMD protein affecting ribosome stability and mRNA decay |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.303691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGAT CCGGAGCCTT CTGCCCGCGC TGTGGCGACG AGATACCGGA CCACGAGCGC
GAGCGCCCGA GCGTCGCGGG CCAGCACGAC CCCGACAGCG TGCTCTGTGA CGGCTGCTAC
TTCGAGGAGT TCGATCTCGT CGACGCGCCG GACCGCATCG AGGTCCGGGT CTGTGCCCAG
TGTGGTGCCG TCCACCGGGG CAACCGCTGG GTCGACGTGG GTGCCGAGGA CTACACCGAC
ATCGCCGTCG ACGAGGTCAG CGAGGCCCTG GGCGTCCACG TCGACGCCCA GTCGGTCGCC
TGGCAGGTCG CGCCCGAACA GGTCGACAAG AACACGATCC GGATGCACGC GGAGTTCTCC
GGAGTCATCC GGGAGACGCC GGTCACCGAG GACGTGGTCG TCCCGGTCAA GATCAGCCGC
CAGACCTGCA CGCGCTGTGG CAAGATCGCG GGCGGTTCGT ACGCCTCGAC GGTGCAGGTG
CGGGCCGACG AGCGCACGCC GACCGACGAC GAGGCCGACC GCGCCAAGGA GATCGCCCAC
GAGGTCGTCG ACGAGATGGA GGCGACGGGC GACCGGGACG CCTTCGTCAC CGAAATCTCC
GAGCCCGAGG AGGGGGTCAA CATCAAGGTC TCGACCAACA AGATCGGGAT GAAAGTCGCC
CGCCAGATCA CGACCGAGCT GGGCGGGACG TTCACCGACA ACGAGACGCT GGTCACCGAG
GATTCGGACG GCAACGAGGT GTATCGGGTC ACGTACGCGA TCCGGCTGCC GCGCTATCGC
CCCGGCGAGG TGATCGATCC GGCGGACGGC GACGGTCCGG TGTTGGTCCG CTCGGTGCAG
GGCAACCTCA AAGGGACGCG CCTCGCGACG GGCGACCCCT TCGAAGCGTC CTTCGAGGAC
GAAAACGCCC CCGACGCCCG TCGCCTGGGG AGCGACGCCG ACGCCGAACG GACCACTCTC
GTCGCCGTCG AGGACGAGCG TGCGGTTCAG GTACTCGACC CCGAGACATA CGAGGCCAAG
ACGATCCCCC GGCCCGACTA CCTCGACACC GACGCCGACG AGGTGGCGGT CCTCAAACAC
CGTGAGGGGC TGCACGTCGT GCCCGACGAG AGCTGA
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| Protein sequence | MSRSGAFCPR CGDEIPDHER ERPSVAGQHD PDSVLCDGCY FEEFDLVDAP DRIEVRVCAQ
CGAVHRGNRW VDVGAEDYTD IAVDEVSEAL GVHVDAQSVA WQVAPEQVDK NTIRMHAEFS
GVIRETPVTE DVVVPVKISR QTCTRCGKIA GGSYASTVQV RADERTPTDD EADRAKEIAH
EVVDEMEATG DRDAFVTEIS EPEEGVNIKV STNKIGMKVA RQITTELGGT FTDNETLVTE
DSDGNEVYRV TYAIRLPRYR PGEVIDPADG DGPVLVRSVQ GNLKGTRLAT GDPFEASFED
ENAPDARRLG SDADAERTTL VAVEDERAVQ VLDPETYEAK TIPRPDYLDT DADEVAVLKH
REGLHVVPDE S
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