Gene Hmuk_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1196 
Symbol 
ID8410716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1137910 
End bp1138788 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content65% 
IMG OID645019532 
Productheat shock protein HtpX 
Protein accessionYP_003177029 
Protein GI257387256 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.383747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGGC AAACAGACTG GGGTCTCCGC GCTCGCATGA TCCTGACGAT GTTCCTGCTG 
TTCGCGCTGT ACATCGTCTT CGTCGCGGTG ATGACTCAGA CTCGCTTCTT CGGTATCGCG
ATCCTGGGGA TGGGCGTGTT CCTGCTGGGA CAGTTCTTCT TCAGCGACAA ACTGGCGCTG
TACTCGATGG GTGCCCGCGA GGTCGAACCC GACGAGTACC CGGAGCTCCA TCGCTCGATC
GAGCGCCTCT CCCAGCAGGC CGACCTCCCG AAGCCGACGG TCGCCGTCGC CGACTCTCGG
GTCCCCAACG CCTTCGCGAC CGGCCGCTCG AAGAAGAGTT CGGCCGTCTG CGTGACGACA
GGTATCATGG AGACGCTGGA TCAGGAGGAA CTGGAGGGGG TCCTGGCCCA CGAGCTGGCC
CACATCAAGA ACCGCGACGT GATGGTGATG ACCATCGCCT CGTTCCTCTC GACGATCGCC
TTCCTCGTCG TCCGGTGGGG CTGGCTGTTC TCGGGCGGGC GGGACCGCGG GGGCAACGGC
GGCGCGCCGG TGCTGGTCGC GATCCTCGTC TCGCTCGTGG TGTGGATCGT CTCGTTCCTC
CTCATCCGAG CGCTGAGCCG CTACCGGGAG TACGCCGCCG ATCGCGGCGG CGCGTCGATC
ACCGGCAACC CCTCGGCGCT CGCGACGGCG CTGATGAAGA TCGACGGCCG AATGGACAAG
GTCCCCAAAG AGGACATGCG CGATCAGGCC GAGATGAACG CCTTCTTCAT CATCCCGATC
AAGTCCGGCT TCGTCGGGAA GCTGTTCAGC ACGCACCCCT CGACGGAACA GCGAATCGAT
CGACTACAGG ACCTGGAGCG GGAGCTGGAA CAGCGGTAA
 
Protein sequence
MEWQTDWGLR ARMILTMFLL FALYIVFVAV MTQTRFFGIA ILGMGVFLLG QFFFSDKLAL 
YSMGAREVEP DEYPELHRSI ERLSQQADLP KPTVAVADSR VPNAFATGRS KKSSAVCVTT
GIMETLDQEE LEGVLAHELA HIKNRDVMVM TIASFLSTIA FLVVRWGWLF SGGRDRGGNG
GAPVLVAILV SLVVWIVSFL LIRALSRYRE YAADRGGASI TGNPSALATA LMKIDGRMDK
VPKEDMRDQA EMNAFFIIPI KSGFVGKLFS THPSTEQRID RLQDLERELE QR