Gene Hmuk_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1193 
Symbol 
ID8410713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1135099 
End bp1136154 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content65% 
IMG OID645019529 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003177026 
Protein GI257387253 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTG ACGAAGTCGT GTTGACCCTC GAAGACGTCG AGGTTCACTT CGAGAACAAG 
TCGTCGCTCC TCGATTTCGG TGGTGAGTCC GAGACCGTCA GAGCCGTCGA CGGCGTCTCA
CTCGACATCT ACGAGCGCGA CGTGATCGCA CTGGTCGGCG AGTCGGGCTG TGGGAAGACG
ACGCTGGGCA AGACTTCGAT CGGTCTCCAG CGACCCACCG GCGGCTCGGT GAAGTACCGG
GGCGAAGACA TCTGGGACAT CCGTGACGGA AAGGTCGACA CCGACACCGA GTGGGCCGAC
ATCCGCCAGT CGCTCCAGAT CATCCACCAG GACCCCGGCG CGTCGCTGAA CCCGAACCGC
CGGCTCGTCT CGATCCTCTC GGAGCCGCTC CGACAGGTCA ACCCGAACCT CTCGAAACAG
GAGAAGCGCG AACGCATCTA CGCGCTCTTA GAGCGTGTGG GTATGACGCC GGCTGCCGAC
TTCGCCGAGC GCTACCCACA CCAGCTCTCG GGCGGCGAAC AACAGCGCGT GGCCCTCTGC
CGGGCGCTGT TGATGAATCC GGACGTGATC TTGGCCGACG AGGCTATCAG CGCCCTGGAC
GTGTCGCTGC GCGTCGAGAT GATGGACCTG ATGCTCGACC TCCAAGAGGA GTTCGACACG
TCCTACGTGT TCATCAGCCA CGACCTCTCG AACGCTCGTT ACTTCACCGC CCACAGCGGC
GGGCGAATCG GCGTGATGTA CCTGGGACAG ATCGCCGAGA TCGGTCCGGC CGAGGCGATG
ATCCAGGATC CCCACCACCC CTACACCAAC GTCCTCCGGT GGGCGACGCC GGACCTCTCC
CTGCAGGACG CGGGCGAGGT CCCGATGCGC AAGATCGACA TCCCGGACCC GATCGATCCG
CCGAAGGGCT GTAACTTCCA GACGCGGTGT CCAGAGGCCC GAGAGGCCTG CCGACAGGCG
GACCCACAGA CCTACCACGC GGAGAACCAG CGCGTCAGGT GCTTCCGCGA GGACGAGGAC
CACGAGTACT GGGAGAGTCC GGAGCTGACG GACTAG
 
Protein sequence
MPGDEVVLTL EDVEVHFENK SSLLDFGGES ETVRAVDGVS LDIYERDVIA LVGESGCGKT 
TLGKTSIGLQ RPTGGSVKYR GEDIWDIRDG KVDTDTEWAD IRQSLQIIHQ DPGASLNPNR
RLVSILSEPL RQVNPNLSKQ EKRERIYALL ERVGMTPAAD FAERYPHQLS GGEQQRVALC
RALLMNPDVI LADEAISALD VSLRVEMMDL MLDLQEEFDT SYVFISHDLS NARYFTAHSG
GRIGVMYLGQ IAEIGPAEAM IQDPHHPYTN VLRWATPDLS LQDAGEVPMR KIDIPDPIDP
PKGCNFQTRC PEAREACRQA DPQTYHAENQ RVRCFREDED HEYWESPELT D