Gene Hmuk_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1192 
Symbol 
ID8410712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1134026 
End bp1135099 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content64% 
IMG OID645019528 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003177025 
Protein GI257387252 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTA CGACCGTCGA AACTCGCGAG CCAGACGCGG AGGATCCCGT CGTAGAGATC 
CGGAACGCCT CGGTGACCTA CGACGACGGC AACTCCTACG TCCTCGATCA CGTCTCGATG
GACGTTCACC GTCACGAAGT GATCGGCGTC ATCGGCGAGA GCGGTTCGGG CAAGTCGATG
CTCGCCGAGT CGATGCTGGA CTCGATTCCA GATCCCGGCA TATTGCGCGG ACAGGTCACG
TACAACCCGA CTGAGGGCGA GCCCATCGAC GTGCTCGACC TGACCACCGA AGAGCTGCGA
CAGCTCCGCT GGGAAGAGAT CTCGATGGTG TTCCAGGGCG CGATGTCGTC GTTCAACCCG
ACGATGCGCG TCGGAAAGCA CTTCGAGGAG ACGCTGTCCG CCCACGACGC GGACGTCGAC
GAGGGGCTGG CGTTCGCCCG CGAACTGCTC CAGGACCTCT ATCTCGAACC CGACCGCGTG
TTGAACTCCT ATCCTCACGA GCTGTCCGGC GGGATGCAAC AGCGGGCCCT GATCGCCCTG
TCGCTGGTGC TGGAGCCCGA GCTTCTCGTG ATGGACGAGC CGACGGCGGC GCTTGACCTG
CTGATGCAGC GCTCGATCCT GCGACTGCTC CGGGAGCTCA AAGAGAAGTA CGACCTGACG
ATGGTCTTTA TCACGCACGA CCTCCCGCTC ATCGCGGCAC TCGCAGACAG ACTCGCGATC
ATGTACGCCT TCCACCCCGT CGAGATCGGA CGGACCGAAG AGATCGTTCG GAACGCGGCC
CACCCGTACA CGCGGGCGCT GCTGAACTCG ACGCCGAACC TCGACGCACC CATCGAGGAG
ATGGTCCCGA TTCCCGGTTC GCAGCCGGCA CCGATCAACG TGCCAGACGG CTGTGCGTAC
CATCCGCGGT GTCCGCTGGC CGACGAGCAG TGTCGCTCTT CGGAACCGGA CTACGCGTCG
ATCGGCGACC GTCACGCGTC CGCGTGCTAC CACTGGGAGG ACGCACGGGA CGAAATATCG
CTCAACTACT CGGAGAACCT TGGCGACGCC GCCCGCTCCG GAGGTGACGA GTGA
 
Protein sequence
MASTTVETRE PDAEDPVVEI RNASVTYDDG NSYVLDHVSM DVHRHEVIGV IGESGSGKSM 
LAESMLDSIP DPGILRGQVT YNPTEGEPID VLDLTTEELR QLRWEEISMV FQGAMSSFNP
TMRVGKHFEE TLSAHDADVD EGLAFARELL QDLYLEPDRV LNSYPHELSG GMQQRALIAL
SLVLEPELLV MDEPTAALDL LMQRSILRLL RELKEKYDLT MVFITHDLPL IAALADRLAI
MYAFHPVEIG RTEEIVRNAA HPYTRALLNS TPNLDAPIEE MVPIPGSQPA PINVPDGCAY
HPRCPLADEQ CRSSEPDYAS IGDRHASACY HWEDARDEIS LNYSENLGDA ARSGGDE